Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   MNY35_RS05570 Genome accession   NZ_CP093298
Coordinates   1250311..1250967 (-) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain MN-13     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1245311..1255967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNY35_RS05550 (MNY35_05550) spxH 1245549..1246451 (+) 903 WP_015417215.1 protease adaptor protein SpxH -
  MNY35_RS05555 (MNY35_05555) - 1246738..1246905 (+) 168 WP_003155026.1 hypothetical protein -
  MNY35_RS05560 (MNY35_05560) pepF 1246943..1248772 (-) 1830 WP_007409107.1 oligoendopeptidase F Regulator
  MNY35_RS05565 (MNY35_05565) - 1249000..1250160 (-) 1161 WP_033574518.1 competence protein CoiA family protein -
  MNY35_RS05570 (MNY35_05570) mecA 1250311..1250967 (-) 657 WP_003155032.1 adaptor protein MecA Regulator
  MNY35_RS05575 (MNY35_05575) - 1251243..1251899 (+) 657 WP_033574517.1 TerC family protein -
  MNY35_RS05580 (MNY35_05580) spx 1251957..1252352 (-) 396 WP_003155034.1 transcriptional regulator Spx -
  MNY35_RS05585 (MNY35_05585) - 1252530..1253108 (-) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  MNY35_RS05590 (MNY35_05590) - 1253226..1254413 (-) 1188 WP_015417212.1 putative glycoside hydrolase -
  MNY35_RS05595 (MNY35_05595) oppF 1254520..1255437 (-) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=663159 MNY35_RS05570 WP_003155032.1 1250311..1250967(-) (mecA) [Bacillus amyloliquefaciens strain MN-13]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=663159 MNY35_RS05570 WP_003155032.1 1250311..1250967(-) (mecA) [Bacillus amyloliquefaciens strain MN-13]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895