Detailed information NTG0663160

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG702_RS24660
• Genome accession: NZ_CP108568
• Coordinates: 5539606..5540889 (+)
• Length: 427 a.a.
• NCBI ID: WP_327291112.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01198
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5534606..5545889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG702_RS24630 (OG702_24660)	-	5534752..5535900 (+)	1149	WP_327291110.1	site-specific integrase	-
OG702_RS24645 (OG702_24675)	tig	5536419..5537810 (+)	1392	WP_327291111.1	trigger factor	-
OG702_RS24650 (OG702_24680)	clpP	5538087..5538692 (+)	606	WP_327293355.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG702_RS24655 (OG702_24685)	clpP	5538768..5539442 (+)	675	WP_251489060.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG702_RS24660 (OG702_24690)	clpX	5539606..5540889 (+)	1284	WP_327291112.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG702_RS24665 (OG702_24695)	-	5540974..5541993 (-)	1020	WP_327291113.1	hypothetical protein	-
OG702_RS24670 (OG702_24700)	-	5542103..5543035 (-)	933	WP_327291114.1	hypothetical protein	-
OG702_RS24675 (OG702_24705)	-	5543154..5545781 (+)	2628	WP_327291115.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46711.68 Da
• Isoelectric Point: 4.9984

>NTDB_id=663160 OG702_RS24660 WP_327291112.1 5539606..5540889(+) (clpX) [Streptomyces sp. NBC_01198]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEDLPKPREIYEFLEGYVVGQTP
AKKALSVAVYNHYKRVQAGENGRPGHDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDV
ENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEIMPEDLVKFGMIPEFIGRLPVITSVHNLDRE
ALLQILVEPRNALVKQYQKLFELDGVELEFERGALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVISA
EVVHSNVNPTLVPREPRIVGKGEQKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=663160 OG702_RS24660 WP_327291112.1 5539606..5540889(+) (clpX) [Streptomyces sp. NBC_01198]
GTGGCACGCATCGGTGACGGCGGAGACCTGCTGAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGTCCT
CCGAGGTCCGCTGGGAGGATCTGCCCAAGCCCCGGGAGATCTACGAGTTCCTGGAGGGCTACGTCGTCGGGCAGACGCCC
GCCAAGAAGGCGCTGTCGGTGGCGGTGTACAACCACTACAAGCGCGTGCAGGCCGGTGAGAACGGCCGCCCGGGCCACGA
CGACGCGATCGAGCTGGCGAAGTCCAACATCCTGCTGCTCGGCCCGACCGGCTCCGGCAAGACGCTGCTGGCCCAGACGC
TGGCCCGGATGCTGAACGTGCCGTTCGCCATCGCCGACGCCACCGCGCTCACCGAGGCCGGCTACGTCGGCGAGGACGTC
GAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACGGGGATCATCTACATCGACGA
GATCGACAAGGTGGCCCGCAAGAGCGAGAATCCGTCGATCACCCGGGACGTCTCGGGCGAGGGCGTGCAGCAGGCGCTGC
TGAAGATCCTTGAGGGCACAACCGCGAGCGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAGATC
GACACCACCAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCGGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGCCAA
GGGCATCGGCTTCGGCGCGACCATCCGCTCCAAGCGGGAGATCCAGGCCAGCGACCAGTTCCAGGAGATCATGCCCGAGG
ACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGCCTCCCGGTCATCACCAGCGTGCACAACCTCGACCGCGAG
GCGCTGCTGCAGATCCTGGTCGAGCCGCGTAACGCGCTGGTGAAGCAGTATCAAAAACTGTTCGAACTCGACGGCGTGGA
GCTGGAGTTCGAGCGGGGTGCGCTGGAGGCCATCGCCGACCAAGCGATCCTGCGGCAGACCGGCGCACGCGGTCTGCGGG
CGATCATGGAGGAGGTGCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTGGTGATCAGCGCC
GAGGTCGTCCACTCCAACGTCAACCCGACCCTGGTGCCGCGCGAGCCGCGCATCGTGGGCAAGGGCGAGCAGAAGAGCGC
CTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (114-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.342	93.911	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.097	96.487	0.532