Detailed information NTG0066002

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SMUNUM_RS09240
• Genome accession: NZ_AP014571
• Coordinates: 1873048..1873443 (-)
• Length: 131 a.a.
• NCBI ID: WP_002263454.1
• Uniprot ID: Q8DS68
• Organism: Streptococcus mutans LP13
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1868048..1878443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMUNUM_RS09215	-	1868098..1868301 (-)	204	Protein_1770	hypothetical protein	-
SMUNUM_RS09220 (SMNUM_1751)	-	1868368..1869675 (-)	1308	WP_002263458.1	extracellular solute-binding protein	-
SMUNUM_RS09225 (SMNUM_1752)	-	1869668..1870348 (-)	681	WP_002263457.1	response regulator transcription factor	-
SMUNUM_RS09230 (SMNUM_1753)	-	1870348..1871670 (-)	1323	WP_002263456.1	sensor histidine kinase	-
SMUNUM_RS09235 (SMNUM_1754)	-	1871670..1872632 (-)	963	WP_286216708.1	sugar ABC transporter substrate-binding protein	-
SMUNUM_RS09240 (SMNUM_1755)	ssbA	1873048..1873443 (-)	396	WP_002263454.1	single-stranded DNA-binding protein	Machinery gene
SMUNUM_RS09245 (SMNUM_1756)	-	1873530..1873886 (-)	357	WP_002264000.1	rhodanese-like domain-containing protein	-
SMUNUM_RS09250 (SMNUM_1757)	-	1873886..1874308 (-)	423	WP_002267583.1	MarR family transcriptional regulator	-
SMUNUM_RS09255 (SMNUM_1758)	ytpR	1874406..1875032 (-)	627	WP_002268890.1	YtpR family tRNA-binding protein	-
SMUNUM_RS09260 (SMNUM_1759)	-	1875029..1875358 (-)	330	WP_002265890.1	thioredoxin family protein	-
SMUNUM_RS09265 (SMNUM_1760)	-	1875336..1875644 (-)	309	WP_002263449.1	DUF4651 domain-containing protein	-
SMUNUM_RS09270 (SMNUM_1761)	pepA	1875704..1876771 (+)	1068	WP_002272112.1	glutamyl aminopeptidase	-
SMUNUM_RS09275 (SMNUM_1762)	proC	1876827..1877597 (+)	771	WP_002268892.1	pyrroline-5-carboxylate reductase	-
SMUNUM_RS09280 (SMNUM_1763)	-	1877682..1878344 (-)	663	WP_002263446.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14841.90 Da
• Isoelectric Point: 6.4855

>NTDB_id=66002 SMUNUM_RS09240 WP_002263454.1 1873048..1873443(-) (ssbA) [Streptococcus mutans LP13]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=66002 SMUNUM_RS09240 WP_002263454.1 1873048..1873443(-) (ssbA) [Streptococcus mutans LP13]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTAGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: Q8DS68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	100	100	1
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	58.036	85.496	0.496
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405