Detailed information NTG0657865

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OHA65_RS13800
• Genome accession: NZ_CP108271
• Coordinates: 2941261..2941878 (-)
• Length: 205 a.a.
• NCBI ID: WP_327283423.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00045
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2936261..2946878

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA65_RS13785 (OHA65_13710)	-	2938006..2938950 (+)	945	WP_327283422.1	hypothetical protein	-
OHA65_RS13790 (OHA65_13715)	clpX	2939063..2940349 (-)	1287	WP_030297265.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA65_RS13795 (OHA65_13720)	clpP	2940503..2941174 (-)	672	WP_323179072.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA65_RS13800 (OHA65_13725)	clpP	2941261..2941878 (-)	618	WP_327283423.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA65_RS13805 (OHA65_13730)	tig	2942211..2943593 (-)	1383	WP_327283424.1	trigger factor	-
OHA65_RS13820 (OHA65_13745)	-	2944187..2944686 (+)	500	Protein_2735	replication initiator	-
OHA65_RS13825 (OHA65_13750)	-	2944679..2944879 (+)	201	WP_327283425.1	excisionase family DNA-binding protein	-
OHA65_RS13830 (OHA65_13755)	-	2945120..2945449 (+)	330	WP_328762749.1	tyrosine-type recombinase/integrase	-
OHA65_RS13835 (OHA65_13760)	-	2945537..2945897 (+)	361	Protein_2738	NUDIX hydrolase	-
OHA65_RS13840 (OHA65_13765)	-	2946059..2946283 (-)	225	WP_328762750.1	e9imm peptide	-
OHA65_RS13845 (OHA65_13770)	-	2946293..2946799 (-)	507	WP_328762751.1	hypothetical protein	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21670.59 Da
• Isoelectric Point: 4.5831

>NTDB_id=657865 OHA65_RS13800 WP_327283423.1 2941261..2941878(-) (clpP) [Streptomyces sp. NBC_00045]
MTNLKPYAAGEPSIGGGLGDHVYNRLLGERIIFLGQQVDDDIANKITAQLLLLAAEPEKDVYLYINSPGGSVTAGMAVYD
TMQYIPNDVVTIGMGMAASMGQFLLTGGAPGKRFALPNTDILMHQGSAGIGGTASDIKIQAEYLLRTKQRMAEITAHHSG
QTVEAIIRDGDRDRWFTAEEAKEYGLIDEIISAASLVPGGGGTGA

Nucleotide

• Length: 618 bp

>NTDB_id=657865 OHA65_RS13800 WP_327283423.1 2941261..2941878(-) (clpP) [Streptomyces sp. NBC_00045]
GTGACGAATCTGAAGCCTTACGCCGCGGGTGAGCCGTCCATCGGTGGCGGCCTCGGCGACCATGTCTACAACCGGCTGCT
CGGCGAGCGCATCATCTTCCTCGGCCAGCAGGTCGACGACGACATCGCGAACAAGATCACGGCGCAGCTCCTCCTCCTGG
CCGCGGAGCCGGAGAAGGACGTCTACCTGTACATCAACAGCCCGGGCGGCTCGGTGACGGCGGGCATGGCGGTCTACGAC
ACCATGCAGTACATCCCGAACGACGTCGTCACCATCGGCATGGGCATGGCGGCCTCCATGGGCCAGTTCCTGCTCACCGG
CGGCGCCCCGGGCAAGCGCTTCGCGCTCCCGAACACGGACATCCTGATGCACCAGGGCTCCGCCGGCATCGGCGGCACCG
CCTCGGACATCAAGATCCAGGCCGAGTACCTGCTGCGCACGAAGCAGCGCATGGCCGAGATCACCGCCCACCACTCCGGC
CAGACCGTGGAGGCGATCATCCGCGACGGCGACCGCGACCGCTGGTTCACCGCGGAGGAGGCCAAGGAGTACGGCCTCAT
CGACGAGATCATCTCCGCCGCGTCGCTGGTCCCGGGCGGCGGCGGCACCGGGGCCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (21-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	52.356	93.171	0.488
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	51.579	92.683	0.478
clpP	Lactococcus lactis subsp. cremoris KW2	50.265	92.195	0.463
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	49.735	92.195	0.459
clpP	Streptococcus mutans UA159	51.124	86.829	0.444
clpP	Streptococcus pneumoniae TIGR4	50.562	86.829	0.439
clpP	Streptococcus pneumoniae Rx1	50.562	86.829	0.439
clpP	Streptococcus pneumoniae D39	50.562	86.829	0.439
clpP	Streptococcus pneumoniae R6	50.562	86.829	0.439
clpP	Streptococcus thermophilus LMG 18311	49.438	86.829	0.429
clpP	Streptococcus thermophilus LMD-9	49.438	86.829	0.429
clpP	Streptococcus pyogenes JRS4	49.438	86.829	0.429
clpP	Streptococcus pyogenes MGAS315	49.438	86.829	0.429