Detailed information NTG0657331

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OHU26_RS22105
• Genome accession: NZ_CP108249
• Coordinates: 4906448..4907065 (+)
• Length: 205 a.a.
• NCBI ID: WP_266629264.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00069
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4901448..4912065

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHU26_RS22070 (OHU26_22020)	repSA	4901611..4902833 (+)	1223	Protein_4346	replication initiator protein RepSA	-
OHU26_RS22075 (OHU26_22025)	-	4902826..4903026 (+)	201	WP_327362771.1	excisionase family DNA-binding protein	-
OHU26_RS22080	-	4903026..4903949 (+)	924	WP_405706683.1	tyrosine-type recombinase/integrase	-
OHU26_RS22085	-	4903846..4904193 (+)	348	WP_405706460.1	tyrosine-type recombinase/integrase	-
OHU26_RS22100 (OHU26_22050)	tig	4904721..4906124 (+)	1404	WP_266629262.1	trigger factor	-
OHU26_RS22105 (OHU26_22055)	clpP	4906448..4907065 (+)	618	WP_266629264.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHU26_RS22110 (OHU26_22060)	clpP	4907152..4907823 (+)	672	WP_323179072.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHU26_RS22115 (OHU26_22065)	clpX	4907977..4909263 (+)	1287	WP_030159377.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHU26_RS22120 (OHU26_22070)	-	4909377..4909589 (+)	213	WP_405702962.1	hypothetical protein	-
OHU26_RS22125 (OHU26_22075)	-	4909645..4910574 (-)	930	WP_266629271.1	hypothetical protein	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21629.54 Da
• Isoelectric Point: 4.6648

>NTDB_id=657331 OHU26_RS22105 WP_266629264.1 4906448..4907065(+) (clpP) [Streptomyces sp. NBC_00069]
MTNLKPYAAGEPSIGGGLGDHVYNRLLGERIIFLGQQVDDDIANKITAQLLLLAAEPDKDIYLYINSPGGSVTAGMAVYD
TMQYIPNDVVTIGMGMAASMGQFLLTGGAQGKRFALPNTDILMHQGSAGIGGTASDIKIQAEYLLRTKQRMAEITAHHSG
QTVEAIIRDGDRDRWFTAEEAKGYGLIDEIISAASLVPGGGGTGA

Nucleotide

• Length: 618 bp

>NTDB_id=657331 OHU26_RS22105 WP_266629264.1 4906448..4907065(+) (clpP) [Streptomyces sp. NBC_00069]
GTGACGAATCTGAAGCCTTACGCCGCGGGTGAGCCGTCCATCGGTGGCGGCCTCGGCGACCATGTCTACAACCGGCTGCT
CGGCGAGCGCATCATCTTCCTCGGCCAGCAGGTCGACGACGACATCGCCAACAAGATCACGGCGCAGCTCCTCCTCCTGG
CCGCGGAGCCGGATAAGGACATCTACCTGTACATCAACAGCCCCGGCGGCTCGGTGACGGCGGGCATGGCGGTCTACGAC
ACCATGCAGTACATCCCGAACGACGTCGTCACCATCGGCATGGGCATGGCGGCCTCCATGGGCCAGTTCCTGCTCACCGG
CGGCGCCCAGGGCAAGCGCTTCGCGCTCCCGAACACCGACATCCTGATGCACCAGGGTTCCGCCGGCATCGGTGGCACCG
CCTCGGACATCAAGATCCAGGCCGAGTACCTGCTGCGCACGAAGCAGCGCATGGCAGAGATCACCGCCCACCACTCCGGC
CAGACCGTGGAGGCGATCATCCGCGACGGCGACCGCGACCGCTGGTTCACCGCGGAGGAGGCCAAGGGGTACGGCCTCAT
CGACGAGATCATCTCCGCCGCGTCGCTGGTCCCGGGCGGCGGCGGCACCGGGGCCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (21-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	51.832	93.171	0.483
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	51.579	92.683	0.478
clpP	Lactococcus lactis subsp. cremoris KW2	50.265	92.195	0.463
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	49.735	92.195	0.459
clpP	Streptococcus mutans UA159	51.685	86.829	0.449
clpP	Streptococcus pneumoniae TIGR4	50.562	86.829	0.439
clpP	Streptococcus pneumoniae Rx1	50.562	86.829	0.439
clpP	Streptococcus pneumoniae D39	50.562	86.829	0.439
clpP	Streptococcus pneumoniae R6	50.562	86.829	0.439
clpP	Streptococcus pyogenes JRS4	50	86.829	0.434
clpP	Streptococcus pyogenes MGAS315	50	86.829	0.434
clpP	Streptococcus thermophilus LMD-9	49.438	86.829	0.429
clpP	Streptococcus thermophilus LMG 18311	49.438	86.829	0.429