Detailed information NTG0656125

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OHA48_RS14475
• Genome accession: NZ_CP108201
• Coordinates: 3127774..3128394 (-)
• Length: 206 a.a.
• NCBI ID: WP_323178083.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00114
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3122774..3133394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA48_RS14445 (OHA48_14485)	-	3122841..3123836 (+)	996	WP_266796783.1	hypothetical protein	-
OHA48_RS14450 (OHA48_14490)	-	3123909..3124181 (-)	273	WP_266796785.1	hypothetical protein	-
OHA48_RS14455 (OHA48_14495)	-	3124433..3124723 (+)	291	Protein_2868	helix-turn-helix domain-containing protein	-
OHA48_RS14460 (OHA48_14500)	-	3124806..3125489 (+)	684	WP_266796787.1	IS630 family transposase	-
OHA48_RS14465 (OHA48_14505)	clpX	3125575..3126864 (-)	1290	WP_266514322.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA48_RS14470 (OHA48_14510)	clpP	3127043..3127723 (-)	681	WP_323178082.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA48_RS14475 (OHA48_14515)	clpP	3127774..3128394 (-)	621	WP_323178083.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA48_RS14480 (OHA48_14520)	tig	3128675..3130075 (-)	1401	WP_266796789.1	trigger factor	-
OHA48_RS14495 (OHA48_14535)	-	3130710..3130901 (-)	192	WP_266680341.1	hypothetical protein	-
OHA48_RS14500 (OHA48_14540)	-	3131241..3131435 (-)	195	WP_266680342.1	hypothetical protein	-
OHA48_RS14505 (OHA48_14545)	-	3132017..3133195 (+)	1179	WP_405672088.1	acyltransferase family protein	-

Sequence

Protein

• Length: 206 a.a.
• Molecular weight: 21881.81 Da
• Isoelectric Point: 4.5852

>NTDB_id=656125 OHA48_RS14475 WP_323178083.1 3127774..3128394(-) (clpP) [Streptomyces sp. NBC_00114]
MTNLMPSAAGEPSIGGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLAAADPDKDINLYINSPGGSITAGMAIY
DTMQFIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHT
GQSFEQITRDSDRDRWFDPEEAKEYGLIDDVITAAVNMPGGGGTGA

Nucleotide

• Length: 621 bp

>NTDB_id=656125 OHA48_RS14475 WP_323178083.1 3127774..3128394(-) (clpP) [Streptomyces sp. NBC_00114]
GTGACGAATCTGATGCCCTCCGCCGCCGGCGAGCCTTCCATCGGTGGCGGTCTCGGCGACCAGGTCTACAACCGGCTGCT
CAACGAGCGGATCATCTTCCTCGGCCAGCCGGTCGACGACGACATCGCGAACAAGATCACCGCACAGTTGCTGCTCCTTG
CCGCTGCGGACCCCGACAAGGACATCAACCTCTACATCAACAGCCCCGGCGGCTCGATCACGGCCGGCATGGCGATCTAC
GACACCATGCAGTTCATCAAGAACGACGTGGTGACGATCGCGATGGGCCTCGCCGCCTCGATGGGCCAGTTCCTGCTCAG
CGCGGGCACCCCCGGCAAGCGCTTCGCGCTGCCGAACGCCGAGATCCTGATCCACCAGCCCTCCGCGGGCCTGGCCGGTT
CGGCCTCGGACATCAAGATTCACGCCGAGCGACTGCTGCACACCAAGAAGCGCATGGCTGAGCTCACGTCTCAGCACACC
GGTCAGTCGTTCGAGCAGATCACTCGCGACTCCGACCGCGACCGTTGGTTCGACCCGGAGGAGGCCAAGGAGTACGGCCT
CATCGACGACGTCATCACCGCGGCCGTCAACATGCCGGGCGGCGGCGGCACCGGGGCCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-193)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	56.021	92.718	0.519
clpP	Lactococcus lactis subsp. cremoris KW2	52.062	94.175	0.49
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.546	94.175	0.485
clpP	Streptococcus mutans UA159	51.042	93.204	0.476
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	52.747	88.35	0.466
clpP	Streptococcus pyogenes MGAS315	49.215	92.718	0.456
clpP	Streptococcus pyogenes JRS4	49.215	92.718	0.456
clpP	Streptococcus thermophilus LMG 18311	51.149	84.466	0.432
clpP	Streptococcus thermophilus LMD-9	51.149	84.466	0.432
clpP	Streptococcus pneumoniae Rx1	50.867	83.981	0.427
clpP	Streptococcus pneumoniae D39	50.867	83.981	0.427
clpP	Streptococcus pneumoniae R6	50.867	83.981	0.427
clpP	Streptococcus pneumoniae TIGR4	50.867	83.981	0.427