Detailed information NTG0656124

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OHA48_RS14470
• Genome accession: NZ_CP108201
• Coordinates: 3127043..3127723 (-)
• Length: 226 a.a.
• NCBI ID: WP_323178082.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00114
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3122043..3132723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA48_RS14445 (OHA48_14485)	-	3122841..3123836 (+)	996	WP_266796783.1	hypothetical protein	-
OHA48_RS14450 (OHA48_14490)	-	3123909..3124181 (-)	273	WP_266796785.1	hypothetical protein	-
OHA48_RS14455 (OHA48_14495)	-	3124433..3124723 (+)	291	Protein_2868	helix-turn-helix domain-containing protein	-
OHA48_RS14460 (OHA48_14500)	-	3124806..3125489 (+)	684	WP_266796787.1	IS630 family transposase	-
OHA48_RS14465 (OHA48_14505)	clpX	3125575..3126864 (-)	1290	WP_266514322.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA48_RS14470 (OHA48_14510)	clpP	3127043..3127723 (-)	681	WP_323178082.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA48_RS14475 (OHA48_14515)	clpP	3127774..3128394 (-)	621	WP_323178083.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA48_RS14480 (OHA48_14520)	tig	3128675..3130075 (-)	1401	WP_266796789.1	trigger factor	-
OHA48_RS14495 (OHA48_14535)	-	3130710..3130901 (-)	192	WP_266680341.1	hypothetical protein	-
OHA48_RS14500 (OHA48_14540)	-	3131241..3131435 (-)	195	WP_266680342.1	hypothetical protein	-

Sequence

Protein

• Length: 226 a.a.
• Molecular weight: 25005.47 Da
• Isoelectric Point: 4.6548

>NTDB_id=656124 OHA48_RS14470 WP_323178082.1 3127043..3127723(-) (clpP) [Streptomyces sp. NBC_00114]
MNDIPGSGLYDRTRAEYTGPAAESRYVIPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDP
DRDISVYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMALPNARVLIHQPYSETGRGQVSD
LEIAANEILRMRAQLEEMLAKHSTTPIEKIREDIERDKILTAEEALSYGLVDQIISTRKMNNAAVR

Nucleotide

• Length: 681 bp

>NTDB_id=656124 OHA48_RS14470 WP_323178082.1 3127043..3127723(-) (clpP) [Streptomyces sp. NBC_00114]
GTGAACGACATCCCCGGCAGCGGCCTGTACGACCGCACGCGCGCCGAGTACACGGGCCCGGCCGCAGAGTCCCGATATGT
CATCCCGCGCTTCGTCGAGCGCACCTCGCAGGGCATCCGCGAGTACGACCCGTACGCGAAGCTCTTCGAGGAGCGCGTGA
TCTTCCTGGGCGTCCAGATCGACGACGCCTCGGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGACCCC
GACCGGGACATCTCGGTCTACATCAACAGCCCCGGCGGCTCCTTCACCGCGCTGACGGCGATCTACGACACCATGCAGTT
CGTGAAGCCGGACATCCAGACGGTCTGCATGGGCCAGGCGGCCTCCGCCGCCGCGATCCTGCTGGCCGCCGGTACGCCCG
GCAAGCGCATGGCGCTGCCGAACGCCCGCGTGCTGATCCACCAGCCCTACAGCGAGACGGGCCGCGGCCAGGTCTCCGAC
CTGGAGATCGCCGCCAACGAGATCCTGCGGATGCGCGCGCAGCTGGAGGAGATGCTGGCCAAGCACTCCACCACGCCGAT
CGAGAAGATCCGCGAGGACATCGAGCGCGACAAGATCCTCACGGCCGAGGAGGCGCTCTCGTACGGCCTGGTCGACCAGA
TCATCTCCACCCGGAAGATGAACAACGCCGCCGTCCGCTAG

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (37-217)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	52.105	84.071	0.438
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.468	83.186	0.412
clpP	Streptococcus thermophilus LMD-9	46.154	86.283	0.398
clpP	Streptococcus thermophilus LMG 18311	46.154	86.283	0.398
clpP	Streptococcus mutans UA159	45.226	88.053	0.398
clpP	Streptococcus pneumoniae Rx1	44.388	86.726	0.385
clpP	Streptococcus pneumoniae D39	44.388	86.726	0.385
clpP	Streptococcus pneumoniae R6	44.388	86.726	0.385
clpP	Streptococcus pneumoniae TIGR4	44.388	86.726	0.385
clpP	Lactococcus lactis subsp. cremoris KW2	44.388	86.726	0.385
clpP	Streptococcus pyogenes JRS4	44.615	86.283	0.385
clpP	Streptococcus pyogenes MGAS315	44.615	86.283	0.385
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	43.367	86.726	0.376