Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG803_RS37270 Genome accession   NZ_CP107894
Coordinates   8185294..8185506 (-) Length   70 a.a.
NCBI ID   WP_327687012.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00467     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 8180294..8190506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG803_RS37245 (OG803_37285) - 8180889..8181413 (-) 525 WP_327686483.1 transposase -
  OG803_RS37250 (OG803_37290) - 8181630..8182483 (-) 854 Protein_7359 ISL3 family transposase -
  OG803_RS37255 (OG803_37295) - 8182986..8183388 (-) 403 Protein_7360 CBS domain-containing protein -
  OG803_RS37260 (OG803_37300) modA 8183850..8184653 (-) 804 WP_327686484.1 molybdate ABC transporter substrate-binding protein -
  OG803_RS37265 (OG803_37305) - 8185013..8185285 (-) 273 WP_327686485.1 hypothetical protein -
  OG803_RS37270 (OG803_37310) dinR/lexA 8185294..8185506 (-) 213 WP_327687012.1 winged helix DNA-binding protein Regulator
  OG803_RS37275 (OG803_37315) - 8185719..8185949 (+) 231 WP_327686486.1 DUF5133 domain-containing protein -
  OG803_RS37280 (OG803_37320) - 8186602..8187482 (+) 881 Protein_7365 SigB/SigF/SigG family RNA polymerase sigma factor -
  OG803_RS37285 (OG803_37325) - 8188006..8188422 (+) 417 WP_327686487.1 hypothetical protein -
  OG803_RS37290 (OG803_37330) - 8188497..8188751 (+) 255 WP_327686488.1 transcriptional regulator -
  OG803_RS37295 (OG803_37335) - 8188859..8189032 (+) 174 WP_327686489.1 hypothetical protein -
  OG803_RS37300 (OG803_37340) - 8189595..8190035 (+) 441 WP_327686490.1 replication-relaxation family protein -

Sequence

Protein


Download         Length: 70 a.a.        Molecular weight: 7630.60 Da        Isoelectric Point: 9.3194

>NTDB_id=648231 OG803_RS37270 WP_327687012.1 8185294..8185506(-) (dinR/lexA) [Streptomyces sp. NBC_00467]
MDHLSARQERILGCIRERIAETGEGPSIRQIGQVVGLSSTSSVAYQLGRLEESGLISRSTSSWRSVRLGT

Nucleotide


Download         Length: 213 bp        

>NTDB_id=648231 OG803_RS37270 WP_327687012.1 8185294..8185506(-) (dinR/lexA) [Streptomyces sp. NBC_00467]
ATGGATCACCTGAGCGCGCGGCAGGAGCGGATCCTCGGCTGCATCCGCGAGCGGATCGCCGAGACCGGCGAGGGACCGAG
CATCCGGCAGATCGGACAGGTCGTGGGCCTGTCGTCCACGTCATCCGTGGCCTACCAGCTCGGACGGCTCGAAGAGTCCG
GGCTGATCAGCCGCAGCACCAGCAGCTGGCGCTCGGTCCGCCTCGGCACCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-61)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

42.647

97.143

0.414