Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG803_RS37490 Genome accession   NZ_CP107894
Coordinates   8225487..8225651 (-) Length   54 a.a.
NCBI ID   WP_327686517.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00467     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 8220487..8230651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG803_RS37465 (OG803_37505) - 8221465..8221627 (+) 163 Protein_7402 transposase -
  OG803_RS37470 - 8221749..8222020 (+) 272 Protein_7403 ATP-binding protein -
  OG803_RS37475 (OG803_37515) - 8222126..8222641 (-) 516 WP_327686514.1 hypothetical protein -
  OG803_RS37480 (OG803_37520) - 8223842..8224090 (+) 249 WP_327686515.1 hypothetical protein -
  OG803_RS37485 (OG803_37525) - 8224277..8224717 (+) 441 WP_327686516.1 hypothetical protein -
  OG803_RS37490 (OG803_37530) dinR/lexA 8225487..8225651 (-) 165 WP_327686517.1 hypothetical protein Regulator
  OG803_RS37495 (OG803_37535) - 8227134..8227454 (-) 321 WP_327686518.1 ATP-binding protein -
  OG803_RS37500 (OG803_37540) - 8228587..8228750 (+) 164 Protein_7409 MerR family transcriptional regulator -
  OG803_RS37505 (OG803_37545) mihF 8228778..8229092 (+) 315 WP_327687019.1 integration host factor, actinobacterial type -
  OG803_RS37510 (OG803_37550) - 8229167..8229418 (-) 252 WP_327686519.1 hypothetical protein -
  OG803_RS37515 (OG803_37555) - 8229683..8230270 (+) 588 WP_327686520.1 hypothetical protein -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 5760.45 Da        Isoelectric Point: 6.9733

>NTDB_id=648232 OG803_RS37490 WP_327686517.1 8225487..8225651(-) (dinR/lexA) [Streptomyces sp. NBC_00467]
MDHLSARQERILTCIRERIAETGEGPSIRQIGQVVGLSSTSSVAYQLDGSKSAG

Nucleotide


Download         Length: 165 bp        

>NTDB_id=648232 OG803_RS37490 WP_327686517.1 8225487..8225651(-) (dinR/lexA) [Streptomyces sp. NBC_00467]
ATGGATCACCTGAGCGCGCGGCAGGAACGCATCCTCACCTGTATCCGTGAGCGGATCGCCGAGACCGGTGAAGGGCCGAG
CATCCGCCAGATCGGGCAGGTCGTCGGCCTGTCGTCCACATCGTCCGTGGCCTACCAGCTCGACGGCTCGAAGAGTGCGG
GCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-48)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

40.741

100

0.407