Detailed information NTG0640544

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: LXF01_RS08165
• Genome accession: NZ_CP090067
• Coordinates: 1629162..1630352 (+)
• Length: 396 a.a.
• NCBI ID: WP_180065086.1
• Uniprot ID: -
• Organism: Acinetobacter sp. SH20PTE14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1624162..1635352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXF01_RS08150 (LXF01_08150)	-	1624233..1625402 (+)	1170	WP_233945369.1	acyl-CoA desaturase	-
LXF01_RS08155 (LXF01_08155)	-	1625525..1627109 (-)	1585	Protein_1561	ATP-binding cassette domain-containing protein	-
LXF01_RS08160 (LXF01_08160)	-	1627809..1628891 (+)	1083	WP_180065087.1	3-deoxy-7-phosphoheptulonate synthase	-
LXF01_RS08165 (LXF01_08165)	pilU	1629162..1630352 (+)	1191	WP_180065086.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
LXF01_RS08170 (LXF01_08170)	gcvH	1630450..1630824 (-)	375	WP_078193810.1	glycine cleavage system protein GcvH	-
LXF01_RS08175 (LXF01_08175)	-	1630897..1631925 (-)	1029	WP_180102050.1	AraC family transcriptional regulator	-
LXF01_RS08180 (LXF01_08180)	-	1632075..1632524 (-)	450	WP_233945370.1	MaoC family dehydratase	-
LXF01_RS08185 (LXF01_08185)	-	1632502..1634376 (-)	1875	WP_180171966.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 396 a.a.
• Molecular weight: 44797.22 Da
• Isoelectric Point: 6.3956

>NTDB_id=640544 LXF01_RS08165 WP_180065086.1 1629162..1630352(+) (pilU) [Acinetobacter sp. SH20PTE14]
MYTAELLEEARRFMFHMLTKVVEYGGSDLFITADFPPSIKHQGMMKPFGQQELDAEKTKLFAYSLMNEKQRKEFEKELEC
NFAISVPNVSRFRVNVFQQQLHVGMVIRTITAEIPNFEKLKLPASLKHVIMEKRGLVLVVGGTGSGKSTSLAALIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
SNNANQTLDRIINFFPEERRNQLLMDLSSNMKAIVSQRLIRTEDGKGRRAAVEIMLNTPLISDLILKGEFHELKAIMAKS
RELGMQTFDQALFDLYNDGAISYEEALRNADSTNELRLQIKLKSSRANGTSAAAQSFSMVEEKKEEPESTEVSEEI

Nucleotide

• Length: 1191 bp

>NTDB_id=640544 LXF01_RS08165 WP_180065086.1 1629162..1630352(+) (pilU) [Acinetobacter sp. SH20PTE14]
ATGTACACTGCTGAATTGCTGGAAGAAGCACGCCGTTTTATGTTCCACATGTTAACAAAAGTGGTTGAATATGGTGGTTC
TGATTTATTTATTACGGCAGATTTTCCACCAAGTATTAAACATCAAGGCATGATGAAACCCTTTGGGCAGCAAGAGCTTG
ATGCTGAGAAAACAAAGCTTTTCGCCTATAGTCTGATGAATGAGAAGCAGCGCAAAGAATTTGAGAAAGAATTAGAATGT
AACTTTGCGATTAGTGTGCCAAACGTTTCACGTTTTCGTGTCAATGTATTTCAGCAACAGTTACATGTAGGTATGGTCAT
TCGTACCATTACCGCAGAAATTCCAAACTTTGAAAAACTTAAATTACCGGCTTCGCTTAAGCATGTAATTATGGAAAAAC
GTGGTTTGGTTTTAGTCGTTGGTGGAACAGGTTCAGGGAAATCAACCTCTTTAGCGGCACTGATTGATTATCGAAATGAA
AACAGCGCAGGGCATATCATCACTGTTGAAGACCCAGTGGAATATGTCCATAAACATAAAAAATCTATGATTACGCATCG
TGAAGTTGGTGTAGATAGTCATTCGTGGCATAACGCCTTAAAAAATACACTACGACAAGCGCCAGACGTGATTTTAATCG
GTGAGATTCGTGATACCGAGACTATGGAACATGCAATTGCCTTTGCTGAAACAGGACATTTATGTTTAGGTACGCTACAT
TCAAATAACGCCAATCAAACCCTAGATCGGATTATTAACTTCTTCCCAGAAGAGCGAAGAAATCAATTGCTTATGGATTT
ATCGAGCAATATGAAAGCGATTGTTTCTCAGCGTTTAATCCGGACTGAAGATGGTAAAGGACGCCGTGCAGCCGTTGAAA
TCATGTTAAACACGCCGCTTATTTCAGATTTGATTTTGAAAGGTGAGTTTCATGAATTAAAAGCGATCATGGCAAAATCT
CGTGAACTTGGGATGCAAACTTTCGACCAAGCTTTATTTGATTTATATAATGACGGCGCAATTTCTTATGAAGAAGCCTT
AAGAAATGCTGATTCAACCAATGAACTACGTTTGCAAATTAAACTAAAAAGTTCACGTGCAAATGGTACTTCAGCGGCTG
CGCAATCGTTTAGTATGGTTGAAGAAAAGAAAGAAGAACCTGAAAGTACCGAAGTTTCGGAAGAAATATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (91-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	61.207	87.879	0.538
pilU	Acinetobacter baylyi ADP1	54.62	92.929	0.508
pilU	Vibrio cholerae strain A1552	51.099	91.919	0.47
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	39.257	95.202	0.374
pilT	Legionella pneumophila strain Lp02	43.333	83.333	0.361
pilT	Legionella pneumophila strain ERS1305867	43.333	83.333	0.361
pilT	Acinetobacter nosocomialis M2	43.333	83.333	0.361
pilT	Acinetobacter baumannii D1279779	43.333	83.333	0.361
pilT	Acinetobacter baumannii strain A118	43.333	83.333	0.361