Detailed information NTG0639630

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: LU301_RS08170
• Genome accession: NZ_CP089978
• Coordinates: 1647238..1648464 (+)
• Length: 408 a.a.
• NCBI ID: WP_305269638.1
• Uniprot ID: -
• Organism: Moraxella sp. ZY210820
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1642238..1653464

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LU301_RS08145 (LU301_08130)	-	1642737..1643291 (+)	555	WP_305269631.1	porin family protein	-
LU301_RS08150 (LU301_08135)	pyrC	1643431..1644465 (+)	1035	WP_305269633.1	dihydroorotase	-
LU301_RS08155 (LU301_08140)	rnt	1644495..1645157 (+)	663	WP_305274029.1	ribonuclease T	-
LU301_RS08165 (LU301_08150)	pilB	1645495..1647216 (+)	1722	WP_305269636.1	type IV-A pilus assembly ATPase PilB	Machinery gene
LU301_RS08170 (LU301_08155)	pilC	1647238..1648464 (+)	1227	WP_305269638.1	type II secretion system F family protein	Machinery gene
LU301_RS08175 (LU301_08160)	pilD	1648464..1649336 (+)	873	WP_305269640.1	A24 family peptidase	Machinery gene
LU301_RS08180 (LU301_08165)	coaE	1649333..1649944 (+)	612	WP_305269642.1	dephospho-CoA kinase	-
LU301_RS08185 (LU301_08170)	-	1649958..1650923 (-)	966	WP_305269645.1	YheT family hydrolase	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 45054.51 Da
• Isoelectric Point: 9.5792

>NTDB_id=639630 LU301_RS08170 WP_305269638.1 1647238..1648464(+) (pilC) [Moraxella sp. ZY210820]
MSVKKAEMMPMFAYVGVDRKGVKIKGEFPAKNMALAKATLRKQGITVDSIREKRPNPLDKFFKPKIKTLDITIFTRQLAT
MMKAGVPLVQSFEIVAEGLDNPAMREVVLGIKGEVEGGNTFAGALKKYPQYFDRLFCSLVESGEQSGALETMLDRVALYK
EKSELLKQKIKSAMKYPITVIAVAIIVTIILMVKVIPVFQELFEGFGAELPAFTQLVVNMSKWMQQWWFVLIMGIAITIF
IFTKAKEKSQKFRDLLDKASLKAPIFGDIIYKAIIARYSRTLATTFAAGVPLIDALESTAGATNNVIYEQAVMKIRDDVA
SGQQLQFAMRNADKFPAMAIQMVAIGEESGALDAMLDKVATHFENEVDTAVDGLTSMMEPLIMAILGVLIGGLVIAMYLP
IFNMGSVI

Nucleotide

• Length: 1227 bp

>NTDB_id=639630 LU301_RS08170 WP_305269638.1 1647238..1648464(+) (pilC) [Moraxella sp. ZY210820]
ATGTCTGTTAAAAAAGCCGAAATGATGCCAATGTTTGCCTATGTCGGTGTTGATCGTAAAGGTGTAAAAATTAAAGGGGA
ATTCCCTGCAAAAAATATGGCACTTGCTAAAGCAACACTACGTAAACAAGGTATTACTGTTGATAGTATTCGAGAAAAGC
GTCCGAATCCTTTAGATAAATTTTTTAAGCCAAAAATTAAAACACTTGATATTACAATTTTCACACGTCAATTAGCAACT
ATGATGAAAGCAGGTGTACCTCTAGTGCAAAGCTTTGAAATTGTAGCTGAAGGTTTAGATAATCCTGCAATGCGTGAAGT
GGTGCTAGGTATTAAAGGTGAGGTTGAGGGGGGTAATACTTTCGCTGGTGCATTAAAAAAATATCCACAATATTTTGACC
GCTTATTCTGCTCCCTTGTTGAATCAGGTGAACAATCTGGTGCTTTAGAAACCATGTTGGATCGAGTGGCACTTTATAAA
GAAAAAAGTGAGCTTTTAAAGCAAAAAATTAAAAGTGCAATGAAATATCCCATTACTGTTATTGCAGTAGCAATTATTGT
AACAATTATTTTGATGGTAAAAGTAATTCCTGTTTTCCAAGAACTATTTGAAGGTTTTGGTGCAGAATTACCTGCATTTA
CTCAGTTAGTAGTGAATATGTCTAAATGGATGCAGCAATGGTGGTTTGTATTGATTATGGGTATAGCAATCACTATTTTT
ATATTCACAAAAGCTAAGGAAAAAAGTCAAAAATTCCGTGATTTGCTTGATAAAGCATCGCTTAAAGCACCTATCTTTGG
AGATATCATTTATAAAGCTATCATTGCACGTTATAGCCGTACTTTAGCGACCACTTTTGCTGCAGGTGTACCTTTAATTG
ATGCTTTAGAATCTACTGCTGGTGCAACAAATAACGTTATTTATGAACAAGCGGTTATGAAAATTCGTGATGATGTTGCG
TCAGGTCAGCAATTACAATTTGCCATGCGTAATGCAGATAAGTTCCCTGCAATGGCAATTCAAATGGTTGCGATTGGTGA
AGAATCAGGTGCATTAGATGCTATGTTAGATAAAGTTGCAACACACTTTGAAAATGAAGTAGATACGGCTGTAGATGGTT
TAACCTCTATGATGGAACCACTGATTATGGCTATTCTTGGTGTGTTAATTGGTGGCTTGGTTATTGCGATGTACTTACCA
ATTTTCAACATGGGTTCTGTAATTTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (74-197)

• Type II secretion system (T2SS), protein F (T2SSF) (279-400)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Acinetobacter baumannii D1279779	82.353	100	0.824
pilC	Acinetobacter baylyi ADP1	75.98	100	0.76
pilC	Pseudomonas stutzeri DSM 10701	59.012	99.265	0.586
pilC	Legionella pneumophila strain ERS1305867	51.889	97.304	0.505
pilG	Neisseria meningitidis 44/76-A	47.013	94.363	0.444
pilG	Neisseria gonorrhoeae MS11	47.013	94.363	0.444
pilC	Vibrio cholerae strain A1552	41.176	100	0.412
pilC	Vibrio campbellii strain DS40M4	40.704	97.549	0.397