Detailed information NTG0629201

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: N4R43_RS01345
• Genome accession: NZ_CP104388
• Coordinates: 234660..234956 (-)
• Length: 98 a.a.
• NCBI ID: WP_167593410.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain LJL7m20
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 229660..239956

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4R43_RS01305 (N4R43_01305)	-	230195..231004 (-)	810	WP_014570791.1	metal ABC transporter permease	-
N4R43_RS01310 (N4R43_01310)	-	230997..231734 (-)	738	WP_012898617.1	metal ABC transporter ATP-binding protein	-
N4R43_RS01315 (N4R43_01315)	-	231911..232753 (-)	843	WP_015427160.1	metal ABC transporter substrate-binding protein	-
N4R43_RS01320 (N4R43_01320)	-	232750..233187 (-)	438	WP_003129992.1	zinc-dependent MarR family transcriptional regulator	-
N4R43_RS01325 (N4R43_01325)	comGG	233269..233553 (-)	285	WP_025017139.1	competence type IV pilus minor pilin ComGG	Machinery gene
N4R43_RS01330 (N4R43_01330)	comGF	233592..234038 (-)	447	WP_029344525.1	competence type IV pilus minor pilin ComGF	Machinery gene
N4R43_RS01335 (N4R43_01335)	comGE	234001..234297 (-)	297	WP_058223572.1	competence type IV pilus minor pilin ComGE	Machinery gene
N4R43_RS01340 (N4R43_01340)	comGD	234269..234628 (-)	360	WP_023188582.1	competence type IV pilus minor pilin ComGD	Machinery gene
N4R43_RS01345 (N4R43_01345)	comGC	234660..234956 (-)	297	WP_167593410.1	competence type IV pilus major pilin ComGC	Machinery gene
N4R43_RS01350 (N4R43_01350)	-	235120..235245 (-)	126	WP_317141343.1	hypothetical protein	-
N4R43_RS01355 (N4R43_01355)	-	235255..236034 (-)	780	WP_317141344.1	peptidoglycan amidohydrolase family protein	-
N4R43_RS01360 (N4R43_01360)	-	236034..236321 (-)	288	WP_317141345.1	phage holin	-
N4R43_RS01365 (N4R43_01365)	-	236335..236559 (-)	225	WP_010905920.1	hemolysin XhlA family protein	-
N4R43_RS01370 (N4R43_01370)	-	236572..236808 (-)	237	WP_317141346.1	hypothetical protein	-
N4R43_RS12325	-	237353..238099 (-)	747	Protein_263	serine/threonine protein phosphatase	-
N4R43_RS01380 (N4R43_01380)	-	238122..238295 (-)	174	WP_096819001.1	hypothetical protein	-
N4R43_RS01385 (N4R43_01385)	-	238295..239416 (-)	1122	WP_317141347.1	hypothetical protein	-

Sequence

Protein

• Length: 98 a.a.
• Molecular weight: 11174.83 Da
• Isoelectric Point: 4.2213

>NTDB_id=629201 N4R43_RS01345 WP_167593410.1 234660..234956(-) (comGC) [Lactococcus lactis strain LJL7m20]
MSFLVTLIEMLIVLAIISILILLFVPNLIKEKSQVQKTGEAAVVKVVESQAQLYELDHDDEKPSLSELLNAGMITQKQIS
AYDNYYDQNKNEERNFND

Nucleotide

• Length: 297 bp

>NTDB_id=629201 N4R43_RS01345 WP_167593410.1 234660..234956(-) (comGC) [Lactococcus lactis strain LJL7m20]
ATGAGTTTTTTAGTTACCTTAATTGAGATGTTAATTGTACTAGCTATTATTAGTATTTTGATATTACTATTTGTTCCAAA
TTTAATTAAAGAAAAATCACAAGTTCAAAAAACTGGAGAAGCGGCAGTTGTAAAAGTAGTAGAAAGTCAAGCTCAACTTT
ATGAATTAGATCATGATGATGAGAAGCCGAGTCTGTCAGAATTGCTCAACGCTGGGATGATTACTCAAAAACAAATTTCT
GCTTACGATAATTACTATGATCAGAACAAAAATGAAGAACGAAATTTTAATGACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Lactococcus lactis subsp. cremoris KW2	89.247	94.898	0.847
comGC/cglC	Streptococcus mitis SK321	54.286	100	0.582
comGC	Streptococcus mutans UA140	57.778	91.837	0.531
comGC	Streptococcus mutans UA159	57.778	91.837	0.531
comGC	Streptococcus gordonii str. Challis substr. CH1	58.427	90.816	0.531
comGC/cglC	Streptococcus mitis NCTC 12261	55.914	94.898	0.531
comGC/cglC	Streptococcus pneumoniae Rx1	55.914	94.898	0.531
comGC/cglC	Streptococcus pneumoniae D39	55.914	94.898	0.531
comGC/cglC	Streptococcus pneumoniae R6	55.914	94.898	0.531
comGC/cglC	Streptococcus pneumoniae TIGR4	55.914	94.898	0.531
comGC	Streptococcus suis isolate S10	59.74	78.571	0.469