Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | LEO77_RS03650 | Genome accession | NZ_CP085465 |
| Coordinates | 768398..768718 (-) | Length | 106 a.a. |
| NCBI ID | WP_216952910.1 | Uniprot ID | - |
| Organism | Aeromonas veronii strain 71506 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 763398..773718
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LEO77_RS03630 (LEO77_03630) | - | 763745..764443 (-) | 699 | WP_005349201.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| LEO77_RS03635 (LEO77_03635) | - | 764733..765704 (+) | 972 | WP_216952909.1 | response regulator | - |
| LEO77_RS03640 (LEO77_03640) | - | 765779..767176 (-) | 1398 | WP_227341975.1 | peptide MFS transporter | - |
| LEO77_RS03645 (LEO77_03645) | galU | 767390..768301 (-) | 912 | WP_227341976.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| LEO77_RS03650 (LEO77_03650) | comEA/comE1 | 768398..768718 (-) | 321 | WP_216952910.1 | ComEA family DNA-binding protein | Machinery gene |
| LEO77_RS03655 (LEO77_03655) | pta | 769096..771276 (-) | 2181 | WP_005339119.1 | phosphate acetyltransferase | - |
| LEO77_RS03660 (LEO77_03660) | - | 771332..772534 (-) | 1203 | WP_005349210.1 | acetate kinase | - |
| LEO77_RS03665 (LEO77_03665) | yfbV | 772839..773279 (+) | 441 | WP_005339116.1 | terminus macrodomain insulation protein YfbV | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11190.19 Da Isoelectric Point: 9.6863
>NTDB_id=618180 LEO77_RS03650 WP_216952910.1 768398..768718(-) (comEA/comE1) [Aeromonas veronii strain 71506]
MLMKKLSAVMLLACLPLLNQPVLAADKTVPKQTTAAPAAVESGKVNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
MLMKKLSAVMLLACLPLLNQPVLAADKTVPKQTTAAPAAVESGKVNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=618180 LEO77_RS03650 WP_216952910.1 768398..768718(-) (comEA/comE1) [Aeromonas veronii strain 71506]
ATGCTGATGAAGAAGCTCTCTGCAGTGATGTTGCTGGCCTGCTTGCCCCTGTTGAACCAACCCGTGCTGGCGGCCGATAA
AACCGTTCCCAAACAGACAACTGCGGCGCCCGCAGCTGTTGAGAGCGGGAAGGTAAATATCAATACCGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGTGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCAGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
ATGCTGATGAAGAAGCTCTCTGCAGTGATGTTGCTGGCCTGCTTGCCCCTGTTGAACCAACCCGTGCTGGCGGCCGATAA
AACCGTTCCCAAACAGACAACTGCGGCGCCCGCAGCTGTTGAGAGCGGGAAGGTAAATATCAATACCGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGTGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCAGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.788 |
100 |
0.509 |
| comEA | Vibrio cholerae C6706 |
50.943 |
100 |
0.509 |
| comEA | Vibrio cholerae strain A1552 |
50.943 |
100 |
0.509 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
58.974 |
73.585 |
0.434 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.33 |
91.509 |
0.406 |
| comEA | Acinetobacter baylyi ADP1 |
48.78 |
77.358 |
0.377 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
46.429 |
79.245 |
0.368 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
46.429 |
79.245 |
0.368 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
46.429 |
79.245 |
0.368 |
| comEA | Vibrio campbellii strain DS40M4 |
40.206 |
91.509 |
0.368 |