Detailed information NTG0593407

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: KTJ85_RS12100
• Genome accession: NZ_CP080509
• Coordinates: 2393017..2393631 (-)
• Length: 204 a.a.
• NCBI ID: WP_212098514.1
• Uniprot ID: -
• Organism: Bacillus sp. 7D3
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2388017..2398631

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KTJ85_RS12070 (KTJ85_12070)	rpsT	2388317..2388583 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
KTJ85_RS12075 (KTJ85_12075)	holA	2388601..2389642 (-)	1042	Protein_2394	DNA polymerase III subunit delta	-
KTJ85_RS12080 (KTJ85_12080)	-	2389682..2389836 (-)	155	Protein_2395	hypothetical protein	-
KTJ85_RS12085 (KTJ85_12085)	-	2389877..2390011 (+)	135	WP_003152870.1	YqzM family protein	-
KTJ85_RS12090 (KTJ85_12090)	comEC	2390030..2392381 (-)	2352	WP_212098512.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KTJ85_RS12095 (KTJ85_12095)	-	2392382..2392951 (-)	570	WP_065981916.1	ComE operon protein 2	-
KTJ85_RS12100 (KTJ85_12100)	comEA	2393017..2393631 (-)	615	WP_212098514.1	helix-hairpin-helix domain-containing protein	Machinery gene
KTJ85_RS12105 (KTJ85_12105)	comER	2393691..2394512 (+)	822	WP_065981918.1	late competence protein ComER	-
KTJ85_RS12110 (KTJ85_12110)	-	2394581..2395318 (-)	738	WP_014470703.1	class I SAM-dependent methyltransferase	-
KTJ85_RS12115 (KTJ85_12115)	rsfS	2395315..2395671 (-)	357	WP_115997664.1	ribosome silencing factor	-
KTJ85_RS12120 (KTJ85_12120)	yqeK	2395688..2396248 (-)	561	WP_032856887.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
KTJ85_RS12125 (KTJ85_12125)	-	2396238..2396807 (-)	570	WP_065981920.1	nicotinate-nucleotide adenylyltransferase	-
KTJ85_RS12130 (KTJ85_12130)	yhbY	2396818..2397108 (-)	291	WP_014470707.1	ribosome assembly RNA-binding protein YhbY	-
KTJ85_RS12135 (KTJ85_12135)	aroE	2397102..2397944 (-)	843	WP_115997665.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22138.41 Da
• Isoelectric Point: 6.9665

>NTDB_id=593407 KTJ85_RS12100 WP_212098514.1 2393017..2393631(-) (comEA) [Bacillus sp. 7D3]
MTKVMMTERQRQYLKILGVCLAAGAVLICILLFRPEKEEPVKQTSVLGQTASAPVTDKKDTADDKIMIDIKGAVRHPGVY
EMKAGDRVTQAIKKAGGLKEKADELNVNLAEQLQDGTVVYIPSEGEKENPPKTAAGGKENASININTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=593407 KTJ85_RS12100 WP_212098514.1 2393017..2393631(-) (comEA) [Bacillus sp. 7D3]
ATGACGAAAGTGATGATGACGGAGCGGCAGAGGCAGTACCTGAAAATTCTTGGCGTTTGTCTTGCGGCAGGGGCGGTTTT
GATCTGCATTTTGCTGTTTCGTCCCGAAAAAGAAGAGCCTGTCAAACAGACGTCCGTTCTCGGCCAAACAGCCTCAGCAC
CCGTAACGGACAAAAAAGACACCGCAGACGATAAAATTATGATTGATATTAAAGGAGCGGTCCGACATCCCGGCGTGTAT
GAAATGAAGGCGGGAGACAGAGTGACGCAAGCCATTAAGAAAGCCGGCGGCCTGAAGGAAAAGGCGGATGAACTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGAACGGTCGTTTATATCCCGAGTGAAGGCGAAAAGGAGAATCCCCCGAAAACCG
CGGCAGGTGGAAAGGAGAATGCTTCTATCAATATCAATACGGCATCTCTGGATGAACTTCAGGCGATTTCCGGAGTGGGA
CAGAAAAAAGCGGAAGCGATTATTGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGTTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (68-122)

• Helix-hairpin-helix motif (HHH_3) (141-202)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	57.949	95.588	0.554
comEA/celA/cilE	Streptococcus mitis SK321	35.945	100	0.382
comEA	Staphylococcus aureus MW2	34.842	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae R6	35.484	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae D39	35.484	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.484	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.484	100	0.377
comEA/celA/cilE	Streptococcus mitis NCTC 12261	35.023	100	0.373
comEA	Staphylococcus aureus N315	33.937	100	0.368
comEA	Latilactobacillus sakei subsp. sakei 23K	32.051	100	0.368