Detailed information NTG0593405

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: KTJ85_RS12090
• Genome accession: NZ_CP080509
• Coordinates: 2390030..2392381 (-)
• Length: 783 a.a.
• NCBI ID: WP_212098512.1
• Uniprot ID: -
• Organism: Bacillus sp. 7D3
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2385030..2397381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KTJ85_RS12055 (KTJ85_12055)	-	2385392..2385730 (-)	339	WP_045510470.1	YqxA family protein	-
KTJ85_RS12060 (KTJ85_12060)	spoIIP	2385747..2386940 (-)	1194	WP_212098511.1	stage II sporulation protein P	-
KTJ85_RS12065 (KTJ85_12065)	gpr	2387008..2388114 (-)	1107	WP_014470697.1	GPR endopeptidase	-
KTJ85_RS12070 (KTJ85_12070)	rpsT	2388317..2388583 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
KTJ85_RS12075 (KTJ85_12075)	holA	2388601..2389642 (-)	1042	Protein_2394	DNA polymerase III subunit delta	-
KTJ85_RS12080 (KTJ85_12080)	-	2389682..2389836 (-)	155	Protein_2395	hypothetical protein	-
KTJ85_RS12085 (KTJ85_12085)	-	2389877..2390011 (+)	135	WP_003152870.1	YqzM family protein	-
KTJ85_RS12090 (KTJ85_12090)	comEC	2390030..2392381 (-)	2352	WP_212098512.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KTJ85_RS12095 (KTJ85_12095)	-	2392382..2392951 (-)	570	WP_065981916.1	ComE operon protein 2	-
KTJ85_RS12100 (KTJ85_12100)	comEA	2393017..2393631 (-)	615	WP_212098514.1	helix-hairpin-helix domain-containing protein	Machinery gene
KTJ85_RS12105 (KTJ85_12105)	comER	2393691..2394512 (+)	822	WP_065981918.1	late competence protein ComER	-
KTJ85_RS12110 (KTJ85_12110)	-	2394581..2395318 (-)	738	WP_014470703.1	class I SAM-dependent methyltransferase	-
KTJ85_RS12115 (KTJ85_12115)	rsfS	2395315..2395671 (-)	357	WP_115997664.1	ribosome silencing factor	-
KTJ85_RS12120 (KTJ85_12120)	yqeK	2395688..2396248 (-)	561	WP_032856887.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
KTJ85_RS12125 (KTJ85_12125)	-	2396238..2396807 (-)	570	WP_065981920.1	nicotinate-nucleotide adenylyltransferase	-
KTJ85_RS12130 (KTJ85_12130)	yhbY	2396818..2397108 (-)	291	WP_014470707.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 87170.04 Da
• Isoelectric Point: 9.1300

>NTDB_id=593405 KTJ85_RS12090 WP_212098512.1 2390030..2392381(-) (comEC) [Bacillus sp. 7D3]
MKYKYLLLPLAAVSATAGIAAANSFWILFFFLLYLLFIIVKIKQHTPVIVCLVSFCLYFFIYTACDAANVSRYQAGSYTE
QALIINIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKKLIEQLEPGMRCTFTGSLEQPGHATIPGGFDYKEYLYSQHI
HWIFSVTSIKQCEKSEQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLLKRSIHSSAALSMSYLLLLLFDP
YLLWQAGFQLSFAVSAALILSSSILKKAGKNRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPF
SVIGFLLLLFSRQAGEFLFYLFDLVMKPVHDFITYAASVDLFAMIASKPDFLSLLMLAVSVFTLFAALEKRGFLKLRKSA
LFFFAVLAYIMFRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYSEESWKEKHHPYSIGEKALIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKKHKVKRLIVPVGFVKEQKDREILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESPDGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPNLKADILKAGHHGSKSSTSEAFLKQLQPETALISAGK
DNRYHHPHEEVLERLKAYSVNVLRTDVSGTIQYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=593405 KTJ85_RS12090 WP_212098512.1 2390030..2392381(-) (comEC) [Bacillus sp. 7D3]
ATGAAATATAAATACCTTCTTCTCCCTCTGGCGGCGGTTTCTGCAACCGCGGGAATTGCCGCCGCTAATTCCTTCTGGAT
CCTATTCTTTTTCCTTCTGTATCTTCTCTTTATTATCGTAAAAATAAAGCAGCACACACCGGTTATCGTCTGCCTCGTTT
CTTTTTGTCTTTATTTCTTTATTTATACGGCTTGTGACGCTGCGAATGTATCCCGGTATCAGGCCGGCAGCTATACTGAA
CAGGCTCTCATAATAAACATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACCCATGACAAAGAAAAATG
GGCTGCTTCGTACAAAATCCGGTCCCTTGAAGAAAAAAAACTCATTGAACAGCTGGAACCGGGGATGCGCTGTACGTTTA
CAGGCTCACTGGAACAGCCCGGACATGCGACGATTCCCGGGGGTTTTGATTATAAGGAATATCTTTACTCCCAGCATATT
CACTGGATATTTTCCGTTACTTCCATTAAGCAGTGCGAAAAATCCGAACAGCCGCTGTTTAAGCTTCTGAACATCAGAAA
GAATTTGATTTCGATCATTCGGAATCATGTACCTGAATCTTCCGCGGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGACATACTGAGCGCTTATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCCCTTATCAGAATTGGACTGACAAGAGAAAAGGCGGGGATGTTGCTGCTGCT
TTTTTTGCCGGTGTATACGTTGTTAAGCGGTGCCGCCCCTTCTGTACTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTTTGAAACGCAGCATTCATTCCTCGGCTGCATTGTCCATGTCTTATCTGCTGCTTCTGCTGTTTGATCCT
TACCTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCGCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGAAAAACAGACTCGCAGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGTTCGCTTCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCGCTCGTCAGTTTTCCGATGAATATGGTGATGGTGCCTTTTTATACGTTATTTGTCATTCCGTTT
TCTGTCATCGGTTTCCTTCTTCTCTTATTTTCCAGGCAGGCGGGGGAATTTTTGTTTTACCTGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTGCAATGATTGCGTCAAAGCCTGACTTTCTGTCGC
TTCTTATGCTTGCGGTTTCCGTTTTTACGCTTTTTGCAGCTTTGGAAAAGAGAGGTTTTTTAAAGCTCAGGAAATCGGCT
CTTTTTTTCTTTGCGGTTTTGGCTTATATAATGTTCCGTCCTTATTTCAGTCCTTGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGATTCACTGTTTATAAGTGCCCCGCACCGTAAAGGTACCGTAATGGTTGATACAGGAGGAGTGATTGCTT
ATTCCGAAGAATCGTGGAAAGAAAAACACCACCCGTATTCTATCGGCGAGAAGGCTTTAATTCCGTTTTTGAACGGAAAG
GGAGTGAAAAAGCTGGATGCACTGATTTTAACCCATGCGGATCAGGATCATATCGGGGAAGCCGGAGTATTAATCAAAAA
ACATAAAGTGAAACGGTTAATTGTCCCCGTGGGGTTCGTGAAGGAACAGAAGGATCGGGAAATATTGAATATGGCGAAAG
AAAATAACATTCCCGTTGCAGAAGCAAAACGGGGCGATACCATAACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGCCTGACGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAGGTGCTGAAAACGTATCCGAATCTGAAGGCCGATATATTGAAGGCCGGTC
ATCACGGCAGCAAAAGCTCTACGAGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAGACAGCGCTGATTTCAGCAGGAAAA
GATAATCGCTATCATCATCCGCATGAAGAAGTGCTGGAGCGTCTGAAAGCTTACTCTGTCAATGTGCTTCGCACTGATGT
TAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCTGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAGGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-470)

• Domain of unknown function (DUF4131) (DUF4131) (26-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	55.829	98.595	0.55