Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   B1NLA3E_RS07220 Genome accession   NC_021171
Coordinates   1481246..1482499 (+) Length   417 a.a.
NCBI ID   WP_015593183.1    Uniprot ID   N0AQX0
Organism   Bacillus sp. 1NLA3E     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1476246..1487499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B1NLA3E_RS07190 (B1NLA3E_06765) - 1476261..1477553 (+) 1293 WP_015593177.1 pitrilysin family protein -
  B1NLA3E_RS07195 (B1NLA3E_06770) - 1477625..1478347 (+) 723 WP_015593178.1 SDR family oxidoreductase -
  B1NLA3E_RS07200 (B1NLA3E_06775) - 1478429..1478686 (+) 258 WP_015593179.1 DUF3243 domain-containing protein -
  B1NLA3E_RS07205 (B1NLA3E_06780) - 1478873..1479661 (+) 789 WP_015593180.1 DUF3388 domain-containing protein -
  B1NLA3E_RS07210 (B1NLA3E_06785) - 1479670..1480590 (+) 921 WP_328285167.1 RodZ domain-containing protein -
  B1NLA3E_RS07215 (B1NLA3E_06790) pgsA 1480651..1481229 (+) 579 WP_015593182.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  B1NLA3E_RS07220 (B1NLA3E_06795) cinA 1481246..1482499 (+) 1254 WP_015593183.1 competence/damage-inducible protein A Machinery gene
  B1NLA3E_RS07225 (B1NLA3E_06800) recA 1482967..1484010 (+) 1044 WP_015593184.1 recombinase RecA Machinery gene
  B1NLA3E_RS07230 (B1NLA3E_06805) rny 1484295..1485854 (+) 1560 WP_015593185.1 ribonuclease Y -
  B1NLA3E_RS07235 (B1NLA3E_06810) - 1485945..1486742 (+) 798 WP_015593186.1 TIGR00282 family metallophosphoesterase -
  B1NLA3E_RS07240 (B1NLA3E_06815) spoVS 1486897..1487157 (+) 261 WP_015593187.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 417 a.a.        Molecular weight: 45038.52 Da        Isoelectric Point: 5.1943

>NTDB_id=58394 B1NLA3E_RS07220 WP_015593183.1 1481246..1482499(+) (cinA) [Bacillus sp. 1NLA3E]
MNAEIIAVGTELLLGQIVNTNAQFLSKQLADLGINVFYHTVVGDNASRLKSALEIAESRSDLIIFTGGLGPTKDDLTKET
ISAHLGKNLVLDDAAIRSIEEYFERTNRIMTENNRKQALVLEGSHVLTNDHGMAPGMALTENNHIYMLLPGPPSEMEPMV
VHYVQPYLLSKISGREKIVSRVLRFFGIGEAALETEIDDLIEAQTNPTIAPLAADGEVTLRLTAKHASVSEAEKMLDFAE
GQICERVGGFLYGYDESSLLEEAMKLLKQHQLTIAAAESLTGGMFQGQLTSVAGASQVLSGGFVCYTNEVKANVLHVKKE
TIETDGVVSERCAAELAENVANLLGAKIGISFTGVAGPTEQEGKAVGTVFVGISFRGQSTKVVKLQLGGNRDAIRKRAVK
YGFYLLIKRITEAQNAV

Nucleotide


Download         Length: 1254 bp        

>NTDB_id=58394 B1NLA3E_RS07220 WP_015593183.1 1481246..1482499(+) (cinA) [Bacillus sp. 1NLA3E]
ATGAATGCTGAGATCATTGCTGTTGGTACTGAACTTTTACTTGGACAAATTGTTAATACAAATGCTCAGTTTCTATCTAA
GCAGCTGGCCGATTTAGGGATTAATGTTTTTTACCATACTGTCGTTGGAGATAATGCCAGTCGCTTGAAATCCGCACTGG
AAATTGCCGAAAGCCGTTCTGACCTGATTATTTTTACGGGAGGGCTTGGACCTACAAAAGATGATTTAACAAAAGAGACA
ATATCCGCCCATTTAGGGAAAAATCTTGTTTTAGATGATGCGGCAATTCGTTCAATTGAAGAATATTTCGAAAGAACCAA
TCGAATTATGACTGAAAACAATCGTAAGCAAGCCTTGGTATTAGAGGGTTCGCATGTGCTGACGAATGATCATGGGATGG
CTCCAGGGATGGCACTAACTGAGAATAACCACATTTATATGCTTCTGCCAGGACCTCCTAGTGAAATGGAACCAATGGTT
GTCCATTACGTTCAACCTTATTTACTATCAAAGATTTCCGGGCGAGAAAAAATTGTTTCAAGGGTTTTACGTTTTTTTGG
AATTGGCGAAGCTGCGCTTGAAACGGAAATCGACGATTTGATAGAAGCACAGACTAACCCAACTATTGCACCGCTTGCAG
CCGATGGAGAAGTGACGTTGCGACTTACTGCTAAGCACGCATCTGTTTCAGAAGCTGAGAAAATGCTTGATTTTGCAGAA
GGACAGATTTGTGAAAGAGTTGGCGGGTTTTTGTATGGTTATGATGAAAGTTCTCTTCTTGAGGAAGCAATGAAGCTTCT
TAAACAGCACCAGTTGACTATTGCTGCTGCAGAAAGCTTGACCGGTGGTATGTTCCAAGGACAGCTAACTTCCGTCGCTG
GTGCTAGTCAGGTTTTATCAGGAGGGTTTGTTTGCTACACTAATGAGGTGAAAGCGAACGTTCTTCATGTTAAAAAGGAA
ACGATTGAAACTGATGGTGTTGTCAGTGAACGTTGTGCGGCGGAATTAGCCGAAAATGTGGCAAATTTGTTGGGTGCAAA
AATTGGAATTAGTTTTACTGGTGTCGCAGGTCCGACTGAACAAGAAGGCAAGGCTGTTGGAACTGTGTTTGTAGGGATTT
CTTTTCGCGGTCAGTCTACTAAAGTAGTAAAGCTTCAACTTGGTGGTAATAGGGATGCGATTCGAAAGCGTGCAGTAAAA
TATGGATTTTATTTATTAATTAAGAGAATAACAGAAGCACAGAATGCGGTTTAG

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(258-409)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N0AQX0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

62.069

97.362

0.604
  cinA Streptococcus pneumoniae TIGR4

48.095

100

0.484
  cinA Streptococcus mutans UA159

47.867

100

0.484
  cinA Streptococcus pneumoniae Rx1

47.857

100

0.482
  cinA Streptococcus pneumoniae R6

47.857

100

0.482
  cinA Streptococcus pneumoniae D39

47.619

100

0.48
  cinA Streptococcus mitis SK321

47.619

100

0.48
  cinA Streptococcus mitis NCTC 12261

47.368

100

0.475
  cinA Streptococcus suis isolate S10

41.005

90.647

0.372

Multiple sequence alignment