Detailed information NTG0583890

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: KU529_RS01620
• Genome accession: NZ_CP077856
• Coordinates: 324914..325225 (+)
• Length: 103 a.a.
• NCBI ID: WP_031763468.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain L5
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 319914..330225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KU529_RS01590 (KU529_01595)	-	320697..320900 (+)	204	WP_000087561.1	YqgQ family protein	-
KU529_RS01595 (KU529_01600)	-	320897..321883 (+)	987	WP_000161311.1	ROK family glucokinase	-
KU529_RS01600 (KU529_01605)	-	321883..322212 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
KU529_RS01605 (KU529_01610)	-	322209..322832 (+)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
KU529_RS01610 (KU529_01615)	comGA	322884..323858 (+)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
KU529_RS01615 (KU529_01620)	comGB	323830..324900 (+)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
KU529_RS01620 (KU529_01625)	comGC	324914..325225 (+)	312	WP_031763468.1	competence type IV pilus major pilin ComGC	Machinery gene
KU529_RS01625 (KU529_01630)	comGD	325203..325649 (+)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
KU529_RS01630 (KU529_01635)	comGE	325636..325935 (+)	300	WP_000844410.1	hypothetical protein	Machinery gene
KU529_RS01635 (KU529_01640)	comGF	325853..326350 (+)	498	WP_078098371.1	competence type IV pilus minor pilin ComGF	Machinery gene
KU529_RS01640 (KU529_01645)	-	326447..326593 (+)	147	WP_001792109.1	hypothetical protein	-
KU529_RS01645 (KU529_01650)	-	326583..327107 (+)	525	WP_001015120.1	shikimate kinase	-
KU529_RS01650 (KU529_01655)	gcvT	327266..328357 (+)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
KU529_RS01655 (KU529_01660)	gcvPA	328377..329723 (+)	1347	WP_000019691.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11329.38 Da
• Isoelectric Point: 8.5268

>NTDB_id=583890 KU529_RS01620 WP_031763468.1 324914..325225(+) (comGC) [Staphylococcus aureus strain L5]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQLKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=583890 KU529_RS01620 WP_031763468.1 324914..325225(+) (comGC) [Staphylococcus aureus strain L5]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGTTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	99.029	100	0.99
comGC	Staphylococcus aureus MW2	99.029	100	0.99
comGC/cglC	Streptococcus pneumoniae Rx1	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae D39	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae R6	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae TIGR4	45.098	99.029	0.447
comGC/cglC	Streptococcus mitis NCTC 12261	50	83.495	0.417
comGC/cglC	Streptococcus mitis SK321	50	83.495	0.417
comYC	Streptococcus gordonii str. Challis substr. CH1	41.837	95.146	0.398
comYC	Streptococcus suis isolate S10	48.718	75.728	0.369
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369