Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | I6L35_RS09945 | Genome accession | NZ_CP077311 |
| Coordinates | 2095000..2095320 (-) | Length | 106 a.a. |
| NCBI ID | WP_216980161.1 | Uniprot ID | - |
| Organism | Aeromonas sp. FDAARGOS 1405 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2090000..2100320
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L35_RS09925 (I6L35_09925) | - | 2090347..2091045 (-) | 699 | WP_167570528.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| I6L35_RS09930 (I6L35_09930) | - | 2091336..2092307 (+) | 972 | WP_216980159.1 | response regulator | - |
| I6L35_RS09935 (I6L35_09935) | - | 2092381..2093778 (-) | 1398 | WP_005341137.1 | peptide MFS transporter | - |
| I6L35_RS09940 (I6L35_09940) | galU | 2093992..2094903 (-) | 912 | WP_216980160.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| I6L35_RS09945 (I6L35_09945) | comEA/comE1 | 2095000..2095320 (-) | 321 | WP_216980161.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| I6L35_RS09950 (I6L35_09950) | pta | 2095658..2097838 (-) | 2181 | WP_005341131.1 | phosphate acetyltransferase | - |
| I6L35_RS09955 (I6L35_09955) | - | 2097894..2099096 (-) | 1203 | WP_005341129.1 | acetate kinase | - |
| I6L35_RS09960 (I6L35_09960) | yfbV | 2099401..2099841 (+) | 441 | WP_043851809.1 | terminus macrodomain insulation protein YfbV | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11311.16 Da Isoelectric Point: 10.0127
>NTDB_id=580756 I6L35_RS09945 WP_216980161.1 2095000..2095320(-) (comEA/comE1) [Aeromonas sp. FDAARGOS 1405]
MRKNSLSIIMLLSALPLFTLPSQAADKVAPKQVTTVAAKQESGKVDINTATLAELTNLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVSGIGPATLEANRDMIIVK
MRKNSLSIIMLLSALPLFTLPSQAADKVAPKQVTTVAAKQESGKVDINTATLAELTNLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=580756 I6L35_RS09945 WP_216980161.1 2095000..2095320(-) (comEA/comE1) [Aeromonas sp. FDAARGOS 1405]
ATGCGTAAAAACAGCTTGTCCATCATCATGTTGCTGTCCGCCCTCCCATTGTTCACCCTGCCCTCGCAGGCTGCAGACAA
GGTCGCCCCCAAGCAGGTCACCACGGTTGCCGCCAAGCAGGAGAGTGGCAAAGTGGATATCAATACGGCAACCCTTGCCG
AGCTCACTAACCTCAAGGGGATTGGTGACAAAAAGGCACAAGCCATCGTCGACTATCGCGAGAAACAGGGCAAATTCACC
TCGGTCGACCAGCTGGCAGATGTGAGTGGCATTGGCCCGGCCACTCTGGAGGCAAACCGTGACATGATCATCGTCAAATA
A
ATGCGTAAAAACAGCTTGTCCATCATCATGTTGCTGTCCGCCCTCCCATTGTTCACCCTGCCCTCGCAGGCTGCAGACAA
GGTCGCCCCCAAGCAGGTCACCACGGTTGCCGCCAAGCAGGAGAGTGGCAAAGTGGATATCAATACGGCAACCCTTGCCG
AGCTCACTAACCTCAAGGGGATTGGTGACAAAAAGGCACAAGCCATCGTCGACTATCGCGAGAAACAGGGCAAATTCACC
TCGGTCGACCAGCTGGCAGATGTGAGTGGCATTGGCCCGGCCACTCTGGAGGCAAACCGTGACATGATCATCGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
48.696 |
100 |
0.528 |
| comEA | Vibrio cholerae C6706 |
50.485 |
97.17 |
0.491 |
| comEA | Vibrio cholerae strain A1552 |
50.485 |
97.17 |
0.491 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.326 |
81.132 |
0.425 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
39.806 |
97.17 |
0.387 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
40.594 |
95.283 |
0.387 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
39.216 |
96.226 |
0.377 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
39.216 |
96.226 |
0.377 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
39.216 |
96.226 |
0.377 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
39.216 |
96.226 |
0.377 |