Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | I6L44_RS20390 | Genome accession | NZ_CP077210 |
| Coordinates | 4476553..4476873 (-) | Length | 106 a.a. |
| NCBI ID | WP_216952910.1 | Uniprot ID | - |
| Organism | Aeromonas sp. FDAARGOS 1414 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4471553..4481873
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L44_RS20370 (I6L44_20370) | - | 4471900..4472598 (-) | 699 | WP_005349201.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| I6L44_RS20375 (I6L44_20375) | - | 4472888..4473859 (+) | 972 | WP_216952909.1 | response regulator | - |
| I6L44_RS20380 (I6L44_20380) | - | 4473934..4475331 (-) | 1398 | WP_139399050.1 | peptide MFS transporter | - |
| I6L44_RS20385 (I6L44_20385) | galU | 4475545..4476456 (-) | 912 | WP_005339121.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| I6L44_RS20390 (I6L44_20390) | comEA/comE1 | 4476553..4476873 (-) | 321 | WP_216952910.1 | ComEA family DNA-binding protein | Machinery gene |
| I6L44_RS20395 (I6L44_20395) | pta | 4477251..4479431 (-) | 2181 | WP_005339119.1 | phosphate acetyltransferase | - |
| I6L44_RS20400 (I6L44_20400) | - | 4479486..4480688 (-) | 1203 | WP_040065015.1 | acetate kinase | - |
| I6L44_RS20405 (I6L44_20405) | yfbV | 4480993..4481433 (+) | 441 | WP_005339116.1 | terminus macrodomain insulation protein YfbV | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11190.19 Da Isoelectric Point: 9.6863
>NTDB_id=579884 I6L44_RS20390 WP_216952910.1 4476553..4476873(-) (comEA/comE1) [Aeromonas sp. FDAARGOS 1414]
MLMKKLSAVMLLACLPLLNQPVLAADKTVPKQTTAAPAAVESGKVNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
MLMKKLSAVMLLACLPLLNQPVLAADKTVPKQTTAAPAAVESGKVNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=579884 I6L44_RS20390 WP_216952910.1 4476553..4476873(-) (comEA/comE1) [Aeromonas sp. FDAARGOS 1414]
ATGCTGATGAAGAAGCTCTCTGCAGTGATGTTGCTGGCCTGCTTGCCCCTGTTGAACCAACCCGTGCTGGCGGCCGATAA
AACCGTTCCCAAACAGACAACTGCGGCGCCCGCAGCTGTTGAGAGCGGGAAGGTAAATATCAATACCGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGTGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAAGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
ATGCTGATGAAGAAGCTCTCTGCAGTGATGTTGCTGGCCTGCTTGCCCCTGTTGAACCAACCCGTGCTGGCGGCCGATAA
AACCGTTCCCAAACAGACAACTGCGGCGCCCGCAGCTGTTGAGAGCGGGAAGGTAAATATCAATACCGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGTGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAAGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.788 |
100 |
0.509 |
| comEA | Vibrio cholerae C6706 |
50.943 |
100 |
0.509 |
| comEA | Vibrio cholerae strain A1552 |
50.943 |
100 |
0.509 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
58.974 |
73.585 |
0.434 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.33 |
91.509 |
0.406 |
| comEA | Acinetobacter baylyi ADP1 |
48.78 |
77.358 |
0.377 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
46.429 |
79.245 |
0.368 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
46.429 |
79.245 |
0.368 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
46.429 |
79.245 |
0.368 |
| comEA | Vibrio campbellii strain DS40M4 |
40.206 |
91.509 |
0.368 |