Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   INT76_RS03280 Genome accession   NZ_CP073084
Coordinates   672072..672719 (-) Length   215 a.a.
NCBI ID   WP_212572153.1    Uniprot ID   -
Organism   Streptococcus oriscaviae strain HKU75     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 667072..677719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INT76_RS03265 (INT76_03265) - 668330..668998 (-) 669 WP_212572142.1 recombinase family protein -
  INT76_RS03270 (INT76_03270) - 669138..669767 (-) 630 WP_212572144.1 Maf family protein -
  INT76_RS03275 (INT76_03275) comEC/celB 669848..672088 (-) 2241 WP_212572146.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  INT76_RS03280 (INT76_03280) comEA/celA/cilE 672072..672719 (-) 648 WP_212572153.1 helix-hairpin-helix domain-containing protein Machinery gene
  INT76_RS03285 (INT76_03285) - 672778..673521 (-) 744 WP_212572155.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  INT76_RS03290 (INT76_03290) - 673621..674370 (+) 750 WP_212572156.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  INT76_RS03295 (INT76_03295) - 674360..674647 (+) 288 WP_212572158.1 GIY-YIG nuclease family protein -
  INT76_RS03300 (INT76_03300) - 674693..674917 (+) 225 WP_212572160.1 hypothetical protein -
  INT76_RS03305 (INT76_03305) - 674997..675197 (-) 201 WP_212572161.1 hypothetical protein -
  INT76_RS03310 (INT76_03310) - 675322..676380 (-) 1059 WP_212572163.1 LLM class flavin-dependent oxidoreductase -
  INT76_RS03315 (INT76_03315) - 676494..676904 (-) 411 WP_212572165.1 hypothetical protein -

Sequence

Protein


Download         Length: 215 a.a.        Molecular weight: 22980.52 Da        Isoelectric Point: 4.1221

>NTDB_id=557829 INT76_RS03280 WP_212572153.1 672072..672719(-) (comEA/celA/cilE) [Streptococcus oriscaviae strain HKU75]
MDKYIEWLKEYKWQLSVPAVALLLIGSFVLFRPAAQSQDQTGLTDFPQTEQTSTSQEDLAASSTEEASQLVVDVKGAVKE
PGLYSLEAGSRVNDAIEAAGGLTDEADPKSINLAQKLTDEAVVYVARVEEQVSIIGSREGDSAGSMQGEKNTKVNLNTAT
EADLQTISGIGAKRAADIIAYREANGGFKTVDDLSNVSGIGDKTMESLRPYVTVD

Nucleotide


Download         Length: 648 bp        

>NTDB_id=557829 INT76_RS03280 WP_212572153.1 672072..672719(-) (comEA/celA/cilE) [Streptococcus oriscaviae strain HKU75]
ATGGACAAATATATTGAATGGCTAAAAGAATACAAGTGGCAGTTATCGGTGCCAGCAGTGGCTTTGTTGTTGATAGGAAG
TTTCGTCCTTTTCCGGCCGGCTGCCCAATCCCAAGACCAAACAGGCTTGACTGATTTTCCACAAACAGAGCAAACCAGCA
CTAGTCAGGAAGACCTTGCAGCGAGTTCGACCGAGGAAGCAAGCCAGTTGGTTGTGGATGTCAAGGGTGCCGTCAAGGAA
CCGGGGCTTTACAGCTTGGAGGCTGGCAGTCGTGTAAATGATGCGATCGAAGCGGCAGGAGGACTGACAGATGAGGCCGA
TCCCAAGTCCATCAATCTGGCTCAGAAACTAACGGATGAAGCCGTGGTTTATGTGGCACGAGTGGAGGAGCAGGTATCTA
TCATCGGTAGTAGAGAAGGTGACAGTGCAGGGTCGATGCAGGGTGAAAAGAATACGAAGGTCAACCTCAATACAGCGACT
GAGGCCGACCTGCAAACCATCTCTGGTATCGGTGCCAAGCGGGCAGCAGATATTATCGCCTATCGAGAGGCCAACGGTGG
TTTCAAGACGGTGGATGACCTGAGCAATGTATCCGGAATTGGTGATAAGACCATGGAAAGCCTAAGACCCTATGTCACAG
TGGATTAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(150-213)

SLBB domain (SLBB)

(71-125)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.