Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | JW886_RS02865 | Genome accession | NZ_CP070872 |
| Coordinates | 574180..574569 (+) | Length | 129 a.a. |
| NCBI ID | WP_205872271.1 | Uniprot ID | A0AA45QRW2 |
| Organism | Lactococcus taiwanensis strain K_LL004 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 569180..579569
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JW886_RS02840 (JW886_02840) | pepA | 569926..570993 (-) | 1068 | WP_205271693.1 | glutamyl aminopeptidase | - |
| JW886_RS02845 (JW886_02845) | - | 571161..571445 (+) | 285 | WP_075524801.1 | hypothetical protein | - |
| JW886_RS02850 (JW886_02850) | - | 571496..571813 (+) | 318 | WP_075524800.1 | thioredoxin family protein | - |
| JW886_RS02855 (JW886_02855) | ytpR | 571932..572558 (+) | 627 | WP_075524799.1 | YtpR family tRNA-binding protein | - |
| JW886_RS02860 (JW886_02860) | nox | 572747..574084 (+) | 1338 | WP_205872270.1 | H2O-forming NADH oxidase | - |
| JW886_RS02865 (JW886_02865) | ssbB | 574180..574569 (+) | 390 | WP_205872271.1 | single-stranded DNA-binding protein | Machinery gene |
| JW886_RS02870 (JW886_02870) | groES | 574786..575070 (+) | 285 | WP_075524796.1 | co-chaperone GroES | - |
| JW886_RS02875 (JW886_02875) | groL | 575153..576781 (+) | 1629 | WP_075524795.1 | chaperonin GroEL | - |
| JW886_RS02880 (JW886_02880) | - | 576845..577657 (-) | 813 | WP_075524794.1 | MBL fold metallo-hydrolase | - |
| JW886_RS02885 (JW886_02885) | - | 577774..579198 (-) | 1425 | WP_205271686.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 129 a.a. Molecular weight: 14714.83 Da Isoelectric Point: 9.2962
>NTDB_id=541201 JW886_RS02865 WP_205872271.1 574180..574569(+) (ssbB) [Lactococcus taiwanensis strain K_LL004]
MNKTMLIGRLTQNPEVTKTTNDKTYVRTTLAVNRRFKNEDGGRDADFIGIILWGKTAETLASYAKKGALISVEGEIRTHS
YMDKQNQKRYMTEVLALNYDLLESRATIALREKSAHTEKLMLEGEELPF
MNKTMLIGRLTQNPEVTKTTNDKTYVRTTLAVNRRFKNEDGGRDADFIGIILWGKTAETLASYAKKGALISVEGEIRTHS
YMDKQNQKRYMTEVLALNYDLLESRATIALREKSAHTEKLMLEGEELPF
Nucleotide
Download Length: 390 bp
>NTDB_id=541201 JW886_RS02865 WP_205872271.1 574180..574569(+) (ssbB) [Lactococcus taiwanensis strain K_LL004]
ATGAATAAAACAATGTTAATTGGTCGCCTTACTCAAAATCCAGAAGTTACCAAAACAACTAATGATAAAACTTATGTGAG
AACCACACTTGCAGTGAACCGACGCTTTAAAAATGAAGACGGGGGACGTGATGCTGATTTTATCGGGATCATTTTATGGG
GGAAGACGGCAGAAACGCTGGCTTCGTACGCTAAAAAAGGGGCTCTCATTTCAGTTGAAGGGGAGATTCGTACACATAGC
TACATGGACAAGCAAAATCAAAAACGTTATATGACAGAGGTGCTCGCTTTAAATTATGATTTGCTAGAAAGTCGAGCAAC
AATCGCCTTGCGGGAAAAGTCAGCACATACTGAAAAGTTGATGCTAGAAGGAGAAGAACTTCCTTTTTAA
ATGAATAAAACAATGTTAATTGGTCGCCTTACTCAAAATCCAGAAGTTACCAAAACAACTAATGATAAAACTTATGTGAG
AACCACACTTGCAGTGAACCGACGCTTTAAAAATGAAGACGGGGGACGTGATGCTGATTTTATCGGGATCATTTTATGGG
GGAAGACGGCAGAAACGCTGGCTTCGTACGCTAAAAAAGGGGCTCTCATTTCAGTTGAAGGGGAGATTCGTACACATAGC
TACATGGACAAGCAAAATCAAAAACGTTATATGACAGAGGTGCTCGCTTTAAATTATGATTTGCTAGAAAGTCGAGCAAC
AATCGCCTTGCGGGAAAAGTCAGCACATACTGAAAAGTTGATGCTAGAAGGAGAAGAACTTCCTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
74.419 |
100 |
0.744 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
56.923 |
100 |
0.574 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
56.154 |
100 |
0.566 |
| ssbB/cilA | Streptococcus mitis SK321 |
56.154 |
100 |
0.566 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.385 |
100 |
0.558 |
| ssbA | Streptococcus mutans UA159 |
53.077 |
100 |
0.535 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
41.739 |
89.147 |
0.372 |