Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SPYOHK_RS08585 | Genome accession | NZ_AFRY01000001 |
| Coordinates | 104337..104621 (+) | Length | 94 a.a. |
| NCBI ID | WP_002987779.1 | Uniprot ID | A0A0H2USY2 |
| Organism | Streptococcus pyogenes HKU QMH11M0907901 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 99337..109621
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPYOHK_RS08610 (SPYOHK_00410) | - | 101283..101648 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| SPYOHK_RS08605 (SPYOHK_00415) | comGA | 101741..102679 (+) | 939 | WP_002987773.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SPYOHK_RS08600 (SPYOHK_00420) | comGB | 102615..103649 (+) | 1035 | WP_223845212.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SPYOHK_RS08595 (SPYOHK_00425) | comGC | 103651..103977 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SPYOHK_RS08590 (SPYOHK_00430) | comGD | 103952..104380 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SPYOHK_RS08585 (SPYOHK_00435) | comGE | 104337..104621 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SPYOHK_RS08580 (SPYOHK_00440) | comGF | 104614..105048 (+) | 435 | WP_002987783.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SPYOHK_RS08575 (SPYOHK_00445) | comGG | 105032..105358 (+) | 327 | WP_002987787.1 | competence type IV pilus minor pilin ComGG | - |
| SPYOHK_RS08570 (SPYOHK_00450) | comGH | 105456..106409 (+) | 954 | WP_002987790.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SPYOHK_RS08565 (SPYOHK_00455) | - | 106468..107664 (+) | 1197 | WP_002987791.1 | acetate kinase | - |
| SPYOHK_RS08560 (SPYOHK_00460) | - | 107851..108159 (+) | 309 | WP_002987795.1 | hypothetical protein | - |
| SPYOHK_RS08555 (SPYOHK_00465) | proC | 108242..109012 (-) | 771 | WP_002986527.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10672.62 Da Isoelectric Point: 8.9043
>NTDB_id=53984 SPYOHK_RS08585 WP_002987779.1 104337..104621(+) (comGE) [Streptococcus pyogenes HKU QMH11M0907901]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=53984 SPYOHK_RS08585 WP_002987779.1 104337..104621(+) (comGE) [Streptococcus pyogenes HKU QMH11M0907901]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |