Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | U722_RS07485 | Genome accession | NC_023073 |
| Coordinates | 1533215..1534237 (+) | Length | 340 a.a. |
| NCBI ID | WP_003154464.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens LFB112 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1528215..1539237
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U722_RS07445 (U722_07875) | - | 1528574..1528813 (+) | 240 | WP_003154475.1 | YlbE-like family protein | - |
| U722_RS07450 (U722_07880) | ylbF | 1528884..1529333 (+) | 450 | WP_003154472.1 | YlbF family regulator | Regulator |
| U722_RS07455 (U722_07885) | - | 1529392..1529664 (+) | 273 | WP_003154470.1 | YlbG family protein | - |
| U722_RS07460 (U722_07890) | - | 1529755..1529964 (+) | 210 | WP_015388275.1 | hypothetical protein | - |
| U722_RS07465 (U722_07895) | rsmD | 1529964..1530518 (+) | 555 | WP_024085271.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| U722_RS07470 (U722_07900) | coaD | 1530523..1531005 (+) | 483 | WP_024085272.1 | pantetheine-phosphate adenylyltransferase | - |
| U722_RS07475 (U722_07905) | ylbJ | 1531024..1532250 (-) | 1227 | WP_024085273.1 | sporulation integral membrane protein YlbJ | - |
| U722_RS07480 (U722_07910) | - | 1532430..1533209 (+) | 780 | WP_014304961.1 | patatin family protein | - |
| U722_RS07485 (U722_07915) | sepM | 1533215..1534237 (+) | 1023 | WP_003154464.1 | SepM family pheromone-processing serine protease | Regulator |
| U722_RS07490 (U722_07920) | - | 1534256..1535503 (-) | 1248 | WP_024085274.1 | nucleotidyltransferase | - |
| U722_RS07495 (U722_07930) | - | 1535712..1536230 (+) | 519 | WP_003154459.1 | YceD family protein | - |
| U722_RS19335 (U722_07935) | rpmF | 1536252..1536431 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| U722_RS07500 (U722_07945) | gerR | 1536590..1537165 (+) | 576 | WP_003154450.1 | sporulation-specific transcriptional regulator GerR | - |
| U722_RS07505 (U722_07950) | - | 1537206..1537688 (-) | 483 | WP_003154449.1 | N-acetyltransferase | - |
| U722_RS07510 (U722_07955) | - | 1537851..1538732 (+) | 882 | WP_024085275.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 340 a.a. Molecular weight: 37418.97 Da Isoelectric Point: 7.3848
>NTDB_id=53350 U722_RS07485 WP_003154464.1 1533215..1534237(+) (sepM) [Bacillus amyloliquefaciens LFB112]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIFASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIFASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
Nucleotide
Download Length: 1023 bp
>NTDB_id=53350 U722_RS07485 WP_003154464.1 1533215..1534237(+) (sepM) [Bacillus amyloliquefaciens LFB112]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATTGCTGTTACATTTATTAAGCTTCCGTATTA
TATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGGATTTTCGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGAGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTCCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGATC
GGAACGTGAAGGTGAAGCCGGATCTCCATTTCAGCATTGAAAATATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAGGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACAGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATTGCTGTTACATTTATTAAGCTTCCGTATTA
TATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGGATTTTCGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGAGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTCCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGATC
GGAACGTGAAGGTGAAGCCGGATCTCCATTTCAGCATTGAAAATATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAGGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACAGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
38.663 |
100 |
0.391 |