Detailed information NTG0528490

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K8B90_RS01065
• Genome accession: NZ_CP082771
• Coordinates: 216282..217307 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli LF82
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 211282..222307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B90_RS01035 (K8B90_01030)	zapB	211366..211611 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K8B90_RS01040 (K8B90_01035)	rraA	211696..212181 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K8B90_RS01045 (K8B90_01040)	menA	212274..213200 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K8B90_RS01050 (K8B90_01045)	hslU	213267..214598 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K8B90_RS01055 (K8B90_01050)	hslV	214608..215138 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K8B90_RS01060 (K8B90_01055)	ftsN	215231..216190 (-)	960	WP_000068846.1	cell division protein FtsN	-
K8B90_RS01065 (K8B90_01060)	cytR	216282..217307 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K8B90_RS01070 (K8B90_01065)	priA	217463..219661 (-)	2199	WP_001305041.1	primosomal protein N'	Machinery gene
K8B90_RS01075 (K8B90_01070)	rpmE	219864..220076 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K8B90_RS01080 (K8B90_01075)	yiiX	220137..220745 (-)	609	WP_000702296.1	YiiX family permuted papain-like enzyme	-
K8B90_RS01085 (K8B90_01080)	metJ	220805..221122 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=528490 K8B90_RS01065 WP_000644904.1 216282..217307(-) (cytR) [Escherichia coli LF82]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=528490 K8B90_RS01065 WP_000644904.1 216282..217307(-) (cytR) [Escherichia coli LF82]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628