Detailed information NTG0528489

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: JG554_RS06495
• Genome accession: NZ_CP068241
• Coordinates: 1358019..1358993 (+)
• Length: 324 a.a.
• NCBI ID: WP_046208169.1
• Uniprot ID: -
• Organism: Staphylococcus sp. 11-B-312
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1353019..1363993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JG554_RS06460 (JG554_06460)	rpmG	1353240..1353389 (+)	150	WP_019469354.1	50S ribosomal protein L33	-
JG554_RS06465 (JG554_06465)	-	1353523..1354065 (+)	543	WP_070039365.1	5-formyltetrahydrofolate cyclo-ligase	-
JG554_RS06470 (JG554_06470)	-	1354077..1355528 (+)	1452	WP_070039363.1	rhomboid family intramembrane serine protease	-
JG554_RS06475 (JG554_06475)	-	1355518..1355717 (+)	200	Protein_1243	YqgQ family protein	-
JG554_RS06480 (JG554_06480)	-	1356024..1357010 (+)	987	WP_070039362.1	glucokinase	-
JG554_RS06485 (JG554_06485)	-	1357010..1357333 (+)	324	WP_046208167.1	MTH1187 family thiamine-binding protein	-
JG554_RS06490 (JG554_06490)	-	1357336..1357959 (+)	624	WP_046208168.1	MBL fold metallo-hydrolase	-
JG554_RS06495 (JG554_06495)	comGA	1358019..1358993 (+)	975	WP_046208169.1	competence type IV pilus ATPase ComGA	Machinery gene
JG554_RS06500 (JG554_06500)	comGB	1358965..1360032 (+)	1068	WP_070039361.1	competence type IV pilus assembly protein ComGB	-
JG554_RS06505 (JG554_06505)	comGC	1360052..1360369 (+)	318	WP_070039360.1	competence type IV pilus major pilin ComGC	Machinery gene
JG554_RS06510 (JG554_06510)	comGD	1360359..1360799 (+)	441	WP_052722073.1	competence type IV pilus minor pilin ComGD	-
JG554_RS06515 (JG554_06515)	-	1360780..1361073 (+)	294	WP_070039359.1	hypothetical protein	-
JG554_RS06525 (JG554_06525)	-	1361616..1362182 (+)	567	WP_260852391.1	shikimate kinase	-
JG554_RS06530 (JG554_06530)	gcvT	1362340..1363431 (+)	1092	WP_064208915.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37029.16 Da
• Isoelectric Point: 9.6681

>NTDB_id=528489 JG554_RS06495 WP_046208169.1 1358019..1358993(+) (comGA) [Staphylococcus sp. 11-B-312]
MKLLFKNIIDKAIKENVSDVHFIPNHKKVYIKFRKKEYLNTIETIEVNIYRKLLTYMKYQAGLDVSTHSTAQSGRYAYKL
KQLYYLRVSTLPLSLGFESCVVRIIPQYFQSSAKALSINQLFKLVHKKQGLILFSGPTGSGKSTLMYQLIVHAKEKLNVN
IITVEDPVERLVEGITQVSINEKAGINYANSFKAILRCDPDIILIGEIRDAMIAKQVIHASLSGHLVLSTIHSNNCKGAL
SRLLEMGISIQELRQTVLSIINQRLVNTSKDERSLIYEQLTREDIAFYFENQLTLPSTFKNLSYKLNEMAKEGEICEETL
NRYL

Nucleotide

• Length: 975 bp

>NTDB_id=528489 JG554_RS06495 WP_046208169.1 1358019..1358993(+) (comGA) [Staphylococcus sp. 11-B-312]
TTGAAGTTACTCTTTAAAAATATCATTGATAAAGCAATTAAGGAAAATGTATCAGATGTACACTTTATTCCAAACCACAA
AAAGGTATACATTAAATTTAGAAAAAAAGAATATTTAAACACTATAGAAACGATAGAAGTCAATATTTATAGGAAGTTGC
TCACATATATGAAATATCAAGCAGGTTTAGATGTATCAACACACAGCACCGCACAAAGTGGAAGATACGCTTACAAACTT
AAACAATTATACTATTTAAGAGTTTCAACTTTACCTTTATCTCTTGGATTTGAAAGTTGCGTAGTGAGAATTATACCTCA
ATATTTTCAAAGTTCAGCAAAAGCACTTAGTATAAATCAATTATTTAAACTAGTCCATAAAAAACAAGGTTTAATACTGT
TTAGTGGACCTACTGGGTCTGGCAAAAGTACGCTAATGTATCAACTGATAGTGCACGCAAAGGAAAAATTAAATGTTAAT
ATAATTACTGTAGAAGACCCTGTAGAACGTTTGGTTGAAGGTATAACACAAGTTTCTATTAATGAAAAAGCAGGGATTAA
TTATGCTAATTCATTCAAGGCGATTTTAAGATGTGATCCAGATATTATACTTATTGGTGAAATCAGGGATGCTATGATTG
CTAAACAAGTTATTCATGCAAGTTTAAGTGGTCACTTAGTACTTTCAACGATACATTCAAATAATTGTAAGGGCGCATTG
AGTAGATTATTAGAAATGGGTATAAGTATTCAAGAACTACGACAGACGGTATTAAGTATTATCAATCAGAGATTAGTAAA
CACCTCAAAAGATGAACGTTCTTTAATTTATGAACAATTAACTCGAGAAGATATAGCATTTTATTTTGAAAATCAACTTA
CACTTCCAAGCACATTCAAAAATTTGTCGTATAAATTGAATGAAATGGCAAAAGAAGGGGAAATTTGTGAAGAAACACTT
AATAGATATCTTTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	59.568	100	0.596
comGA	Staphylococcus aureus N315	59.568	100	0.596