Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   JJN14_RS09995 Genome accession   NZ_CP067992
Coordinates   2031187..2032368 (+) Length   393 a.a.
NCBI ID   WP_153219714.1    Uniprot ID   A0A7X1QVY1
Organism   Streptococcus mitis strain S022-V7-A3     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2026187..2037368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS09955 (JJN14_09955) - 2027248..2027790 (+) 543 WP_201058573.1 TetR/AcrR family transcriptional regulator -
  JJN14_RS09970 (JJN14_09970) comE 2028033..2028785 (-) 753 WP_000866073.1 competence system response regulator transcription factor ComE Regulator
  JJN14_RS09975 (JJN14_09975) comD 2028782..2030107 (-) 1326 WP_201058574.1 competence system sensor histidine kinase ComD Regulator
  JJN14_RS09980 (JJN14_09980) comC/comC2 2030120..2030242 (-) 123 WP_020902306.1 competence-stimulating peptide ComC Regulator
  JJN14_RS09990 (JJN14_09990) rlmH 2030524..2031003 (-) 480 WP_064276841.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JJN14_RS09995 (JJN14_09995) htrA 2031187..2032368 (+) 1182 WP_153219714.1 S1C family serine protease Regulator
  JJN14_RS10000 (JJN14_10000) spo0J 2032426..2033184 (+) 759 WP_049509403.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 41753.69 Da        Isoelectric Point: 6.5090

>NTDB_id=526191 JJN14_RS09995 WP_153219714.1 2031187..2032368(+) (htrA) [Streptococcus mitis strain S022-V7-A3]
MKHLKIFYKKWFQLLVVIVISFFSGALGSFSITQLTQKIGVSSSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSA
NRQNSVFGNDDTNTDSQQISSEGSGVIYKKNDKEAYIVTNNHVINGASKVDIRLSDGTKVPGEIVGADTFSDIAVVKISS
EKVTTVAEFGDSSKLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLIN
IQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNINTSDIRRLNIPSSVTSGVV
VRSVQSNMPANGHLEKYDVITKVDDKDIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLDKSSGDLES

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=526191 JJN14_RS09995 WP_153219714.1 2031187..2032368(+) (htrA) [Streptococcus mitis strain S022-V7-A3]
ATGAAACATCTAAAAATATTTTACAAAAAATGGTTTCAATTATTAGTCGTTATCGTCATTAGCTTTTTTAGTGGAGCCTT
GGGTAGTTTTTCAATAACCCAGCTAACTCAAAAAATTGGTGTAAGTAGCTCGAACAACAATAGCACCATTACACAGACTG
CCTATAAGAACGAAAATTCAACAACACAGGCTGTTAACAAAGTAAAAGATGCTGTTGTTTCTGTTATTACTTATTCAGCA
AACAGACAAAATAGCGTATTTGGTAATGATGATACTAACACAGATTCTCAGCAAATCTCTAGTGAAGGCTCTGGGGTTAT
TTATAAAAAGAATGACAAAGAAGCTTACATTGTCACCAACAATCACGTTATAAATGGCGCCAGCAAAGTAGATATTCGTT
TGTCAGATGGAACTAAAGTACCTGGAGAAATCGTCGGAGCTGATACTTTCTCTGATATCGCTGTCGTCAAAATCTCTTCA
GAAAAAGTGACAACAGTAGCTGAGTTTGGTGATTCTAGCAAGTTAACCGTAGGAGAAACTGCTATTGCCATCGGTAGCCC
GTTAGGTTCTGAATATGCAAATACTGTCACTCAAGGTATCGTATCTAGTCTTAATCGAAATGTATCTTTAAAATCTGAAG
ATGGACAAGCCATTTCTACGAAAGCCATCCAAACTGATACTGCTATTAACCCAGGTAACTCTGGTGGCCCACTAATCAAT
ATTCAAGGACAGGTTATCGGAATTACCTCAAGTAAAATTGCCACAAATGGAGGAACATCTGTAGAAGGTCTTGGTTTTGC
AATCCCTGCAAATGATGCTATCAATATTATTGAACAATTAGAAAAGAACGGAAAAGTGACTCGTCCAGCTTTGGGAATTC
AAATGGTCAATCTCTCAAATATTAATACAAGTGATATTAGAAGACTGAATATTCCAAGCAGTGTAACATCTGGTGTAGTT
GTTCGTTCTGTGCAAAGTAATATGCCTGCAAATGGTCACCTTGAAAAATACGATGTTATTACAAAAGTAGATGACAAAGA
CATCGCTTCATCAACAGACTTACAAAGTGCTCTTTACAATCATTCTATCGGAGACACCATTAAGATAACTTACTATCGTA
ACGGTAAAGAAGAAACTACATCTATTAAACTTGACAAGAGTTCAGGTGATTTAGAATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7X1QVY1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

97.455

100

0.975

  htrA Streptococcus pneumoniae D39

96.692

100

0.967

  htrA Streptococcus pneumoniae R6

96.692

100

0.967

  htrA Streptococcus pneumoniae Rx1

96.692

100

0.967

  htrA Streptococcus pneumoniae TIGR4

96.692

100

0.967

  htrA Streptococcus gordonii str. Challis substr. CH1

65.829

100

0.667

  htrA Streptococcus mutans UA159

54.315

100

0.545