Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   JJN14_RS10000 Genome accession   NZ_CP067992
Coordinates   2032426..2033184 (+) Length   252 a.a.
NCBI ID   WP_049509403.1    Uniprot ID   A0A1F0B2E9
Organism   Streptococcus mitis strain S022-V7-A3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2027426..2038184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS09970 (JJN14_09970) comE 2028033..2028785 (-) 753 WP_000866073.1 competence system response regulator transcription factor ComE Regulator
  JJN14_RS09975 (JJN14_09975) comD 2028782..2030107 (-) 1326 WP_201058574.1 competence system sensor histidine kinase ComD Regulator
  JJN14_RS09980 (JJN14_09980) comC/comC2 2030120..2030242 (-) 123 WP_020902306.1 competence-stimulating peptide ComC Regulator
  JJN14_RS09990 (JJN14_09990) rlmH 2030524..2031003 (-) 480 WP_064276841.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JJN14_RS09995 (JJN14_09995) htrA 2031187..2032368 (+) 1182 WP_153219714.1 S1C family serine protease Regulator
  JJN14_RS10000 (JJN14_10000) spo0J 2032426..2033184 (+) 759 WP_049509403.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28963.29 Da        Isoelectric Point: 6.8944

>NTDB_id=526192 JJN14_RS10000 WP_049509403.1 2032426..2033184(+) (spo0J) [Streptococcus mitis strain S022-V7-A3]
MEKFEMISITDIQKNPYQPRKEFDGEKLHELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKQ
LSDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQIISEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKLQKTNHFIQNEEEQLKKLLGLDVEIKLSKKDSGKIIIAFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=526192 JJN14_RS10000 WP_049509403.1 2032426..2033184(+) (spo0J) [Streptococcus mitis strain S022-V7-A3]
ATGGAAAAATTTGAAATGATTTCTATCACGGATATACAAAAAAATCCCTATCAACCTCGAAAAGAATTTGATGGAGAAAA
ACTACATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGCGCTTCACTTTTAGCTGGTCTAACGTCTATCCCAGCTGTTGTTAAACAA
CTTTCAGACCAAGAGATGATGGTCCAGTCCATCATTGAAAATTTACAAAGAGAAAATTTAAATCCAATAGAAGAAGCACG
CGCCTATGAATCTCTTGTAGAGAAAGGATTTACCCATGCTGAAATTGCAGATAAAATGGGCAAGTCTCGTCCTTATATCA
GCAACTCCATTCGTTTGCTTTCCTTACCAGAACAGATTATCTCAGAAGTAGAAAATGGCAAACTATCACAAGCTCATGCG
CGTTCTCTAGTTGGGTTGAATAAGGAACAACAAGACTATTTCTTTCAACGAATTATAGAGGAAGACATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACTTCAAAAAACGAATCATTTCATACAAAATGAAGAAGAACAGT
TAAAAAAACTACTCGGATTAGATGTAGAAATCAAACTGTCTAAAAAAGATAGCGGAAAAATCATTATTGCTTTCTCAAAT
CAAGAAGAATACAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(145-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F0B2E9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

49.407

100

0.496