Detailed information NTG0052056

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SMUGS5_RS08860
• Genome accession: NC_018089
• Coordinates: 1836785..1837180 (-)
• Length: 131 a.a.
• NCBI ID: WP_002263454.1
• Uniprot ID: Q8DS68
• Organism: Streptococcus mutans GS-5
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1831785..1842180

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMUGS5_RS10245	-	1831836..1832039 (-)	204	Protein_1721	hypothetical protein	-
SMUGS5_RS08840 (SMUGS5_08820)	-	1832105..1833412 (-)	1308	WP_002263458.1	extracellular solute-binding protein	-
SMUGS5_RS08845 (SMUGS5_08825)	-	1833405..1834085 (-)	681	WP_002263457.1	response regulator transcription factor	-
SMUGS5_RS08850 (SMUGS5_08830)	-	1834085..1835407 (-)	1323	WP_014835046.1	sensor histidine kinase	-
SMUGS5_RS08855 (SMUGS5_08835)	-	1835407..1836369 (-)	963	WP_002274067.1	sugar ABC transporter substrate-binding protein	-
SMUGS5_RS08860 (SMUGS5_08840)	ssbA	1836785..1837180 (-)	396	WP_002263454.1	single-stranded DNA-binding protein	Machinery gene
SMUGS5_RS08865 (SMUGS5_08845)	-	1837267..1837623 (-)	357	WP_002264000.1	rhodanese-like domain-containing protein	-
SMUGS5_RS08870 (SMUGS5_08850)	-	1837623..1838045 (-)	423	WP_014835047.1	MarR family winged helix-turn-helix transcriptional regulator	-
SMUGS5_RS08875 (SMUGS5_08855)	ytpR	1838143..1838769 (-)	627	WP_014835048.1	YtpR family tRNA-binding protein	-
SMUGS5_RS08880 (SMUGS5_08860)	-	1838766..1839095 (-)	330	WP_002265890.1	thioredoxin family protein	-
SMUGS5_RS08885 (SMUGS5_08865)	-	1839073..1839381 (-)	309	WP_002263449.1	DUF4651 domain-containing protein	-
SMUGS5_RS08890 (SMUGS5_08870)	pepA	1839441..1840508 (+)	1068	WP_002264005.1	glutamyl aminopeptidase	-
SMUGS5_RS08895 (SMUGS5_08875)	proC	1840564..1841334 (+)	771	WP_002267840.1	pyrroline-5-carboxylate reductase	-
SMUGS5_RS08900 (SMUGS5_08880)	-	1841420..1842082 (-)	663	WP_002266816.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14841.90 Da
• Isoelectric Point: 6.4855

>NTDB_id=52056 SMUGS5_RS08860 WP_002263454.1 1836785..1837180(-) (ssbA) [Streptococcus mutans GS-5]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=52056 SMUGS5_RS08860 WP_002263454.1 1836785..1837180(-) (ssbA) [Streptococcus mutans GS-5]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTAGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: Q8DS68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	100	100	1
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	58.036	85.496	0.496
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405