Detailed information NTG0513317

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: I6G42_RS08545
• Genome accession: NZ_CP065707
• Coordinates: 1736667..1737137 (-)
• Length: 156 a.a.
• NCBI ID: WP_000609594.1
• Uniprot ID: A0A4V0BWD1
• Organism: Streptococcus oralis strain FDAARGOS_885
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1731667..1742137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G42_RS08510 (I6G42_08510)	-	1731736..1732671 (-)	936	WP_000036036.1	manganese-dependent inorganic pyrophosphatase	-
I6G42_RS08515 (I6G42_08515)	-	1732757..1733041 (-)	285	WP_038805493.1	GIY-YIG nuclease family protein	-
I6G42_RS08520 (I6G42_08520)	-	1733031..1733777 (-)	747	WP_038805494.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
I6G42_RS08525 (I6G42_08525)	-	1733813..1734172 (-)	360	WP_038805495.1	S1 RNA-binding domain-containing protein	-
I6G42_RS08530 (I6G42_08530)	-	1734174..1735574 (-)	1401	WP_038805496.1	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	-
I6G42_RS08535 (I6G42_08535)	-	1735656..1736165 (-)	510	WP_038805497.1	GNAT family N-acetyltransferase	-
I6G42_RS08540 (I6G42_08540)	rpsR	1736396..1736635 (-)	240	WP_000068664.1	30S ribosomal protein S18	-
I6G42_RS08545 (I6G42_08545)	ssbA	1736667..1737137 (-)	471	WP_000609594.1	single-stranded DNA-binding protein SsbA	Machinery gene
I6G42_RS08550 (I6G42_08550)	rpsF	1737149..1737439 (-)	291	WP_001151782.1	30S ribosomal protein S6	-
I6G42_RS08555 (I6G42_08555)	-	1737572..1738780 (-)	1209	WP_038805498.1	MFS transporter	-
I6G42_RS08560 (I6G42_08560)	asnS	1738904..1740247 (-)	1344	WP_000167158.1	asparagine--tRNA ligase	-
I6G42_RS08565 (I6G42_08565)	-	1740400..1741578 (-)	1179	WP_038805499.1	pyridoxal phosphate-dependent aminotransferase	-
I6G42_RS08570 (I6G42_08570)	-	1741588..1742064 (-)	477	WP_038805500.1	DUF5590 domain-containing protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17353.23 Da
• Isoelectric Point: 4.9057

>NTDB_id=513317 I6G42_RS08545 WP_000609594.1 1736667..1737137(-) (ssbA) [Streptococcus oralis strain FDAARGOS_885]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGITGRIQTR
SYDNQQGQRVYVTEVVADNFQMLESRSVREGHTGGAYSAPTASYTAPTQSVPDFSRDENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=513317 I6G42_RS08545 WP_000609594.1 1736667..1737137(-) (ssbA) [Streptococcus oralis strain FDAARGOS_885]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTCAAGAGTCAAAATGGCGAACGTGAGGCTGATTTCATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACTGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGACAATTTCCAAATGTTGGAAAGCCGTAG
CGTGCGTGAAGGACATACAGGTGGGGCTTATTCTGCACCAACTGCTAGTTATACAGCACCTACACAATCAGTACCTGACT
TTTCACGTGATGAAAATCCATTTGGAGCAACCAATCCGTTGGATATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A4V0BWD1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	54.07	100	0.596
ssb	Latilactobacillus sakei subsp. sakei 23K	54.706	100	0.596
ssbB	Bacillus subtilis subsp. subtilis str. 168	55.66	67.949	0.378
ssbB/cilA	Streptococcus pneumoniae TIGR4	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378
ssbB/cilA	Streptococcus mitis SK321	49.573	75	0.372
ssbB/cilA	Streptococcus mitis NCTC 12261	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae Rx1	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae D39	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae R6	49.573	75	0.372