Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | IRJ17_RS16485 | Genome accession | NZ_CP064090 |
| Coordinates | 3428609..3429853 (+) | Length | 414 a.a. |
| NCBI ID | WP_122965254.1 | Uniprot ID | - |
| Organism | Brevibacillus parabrevis strain B3 | ||
| Function | unknown (predicted from homology) Unclear |
||
Genomic Context
Location: 3423609..3434853
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IRJ17_RS16460 | - | 3424378..3424647 (+) | 270 | WP_122965251.1 | DUF3243 domain-containing protein | - |
| IRJ17_RS16465 | - | 3424761..3425540 (+) | 780 | WP_122965252.1 | YmfK family protein | - |
| IRJ17_RS16470 | - | 3425553..3426458 (+) | 906 | WP_122965253.1 | helix-turn-helix domain-containing protein | - |
| IRJ17_RS16475 | rimO | 3426578..3427924 (+) | 1347 | WP_173596504.1 | 30S ribosomal protein S12 methylthiotransferase RimO | - |
| IRJ17_RS16480 | pgsA | 3427925..3428500 (+) | 576 | WP_063227562.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| IRJ17_RS16485 | cinA | 3428609..3429853 (+) | 1245 | WP_122965254.1 | competence/damage-inducible protein A | Machinery gene |
| IRJ17_RS16490 | - | 3429861..3431450 (+) | 1590 | WP_122965255.1 | DEAD/DEAH box helicase | - |
| IRJ17_RS16495 | recA | 3431617..3432675 (+) | 1059 | WP_122965256.1 | recombinase RecA | Machinery gene |
| IRJ17_RS16500 | - | 3432793..3433440 (+) | 648 | WP_173598865.1 | RecX family transcriptional regulator | - |
Sequence
Protein
Download Length: 414 a.a. Molecular weight: 44848.31 Da Isoelectric Point: 4.9172
>NTDB_id=499019 IRJ17_RS16485 WP_122965254.1 3428609..3429853(+) (cinA) [Brevibacillus parabrevis strain B3]
MRAEIIAVGTELLLGQIANTNAQFLSQKLAEIGVGVYFHSVVGDNTQRLQQVIALAADRSDLVIFTGGLGPTQDDLTKET
VAGHVGVGLETNPEAMERIEQFFLQRGIVMTENNRKQALVLSGSHVFPNDFGMAPGMAIRHDSCTFVLLPGPPSELYPMV
EHYVMPYLTDLLPEKRVFHSHVLRFYGIGESALEERLLDLIEKQDNPTIAPYAKEFEVTLRITARASTAEEGEALILPVE
EEIRKRVGEYVYGMGEDSSLHDVLVSELKKRNETIACAESCTGGTIASLITSVPGSSSVFQGGIVCYTNDVKNQLLDVPE
EVLSTDGAVSRQTAQLLAENVRAKLGATYGVSVTGVAGPDPSEGKPVGLVYVGIAGEGMPTVVKELRLAGRRKAIVGRAA
KFALFYALQMQKER
MRAEIIAVGTELLLGQIANTNAQFLSQKLAEIGVGVYFHSVVGDNTQRLQQVIALAADRSDLVIFTGGLGPTQDDLTKET
VAGHVGVGLETNPEAMERIEQFFLQRGIVMTENNRKQALVLSGSHVFPNDFGMAPGMAIRHDSCTFVLLPGPPSELYPMV
EHYVMPYLTDLLPEKRVFHSHVLRFYGIGESALEERLLDLIEKQDNPTIAPYAKEFEVTLRITARASTAEEGEALILPVE
EEIRKRVGEYVYGMGEDSSLHDVLVSELKKRNETIACAESCTGGTIASLITSVPGSSSVFQGGIVCYTNDVKNQLLDVPE
EVLSTDGAVSRQTAQLLAENVRAKLGATYGVSVTGVAGPDPSEGKPVGLVYVGIAGEGMPTVVKELRLAGRRKAIVGRAA
KFALFYALQMQKER
Nucleotide
Download Length: 1245 bp
>NTDB_id=499019 IRJ17_RS16485 WP_122965254.1 3428609..3429853(+) (cinA) [Brevibacillus parabrevis strain B3]
ATGAGAGCGGAGATTATCGCAGTAGGTACCGAGCTTTTGCTAGGCCAGATTGCCAACACCAATGCTCAGTTTCTCTCGCA
AAAACTGGCGGAAATTGGTGTCGGAGTGTATTTTCATTCCGTTGTCGGCGATAACACGCAGCGGTTGCAGCAGGTGATCG
CCCTCGCAGCCGACCGTTCCGATCTTGTCATTTTTACGGGTGGGCTTGGACCGACTCAGGATGACCTGACAAAAGAAACA
GTGGCAGGGCACGTGGGCGTCGGACTGGAGACAAATCCGGAAGCCATGGAAAGAATTGAACAATTCTTTTTGCAACGTGG
GATTGTCATGACGGAAAACAATCGGAAGCAGGCGCTGGTTCTCTCAGGCAGCCATGTCTTCCCCAATGACTTCGGGATGG
CGCCTGGGATGGCGATCCGTCATGACAGTTGCACGTTCGTGCTTCTCCCTGGACCGCCTAGCGAGCTGTACCCGATGGTG
GAGCATTACGTCATGCCGTACTTGACGGATCTGTTGCCGGAGAAGCGAGTATTTCATTCTCATGTGCTGCGTTTCTACGG
GATCGGTGAGTCTGCTCTGGAGGAGCGGTTGCTGGATCTGATTGAAAAACAGGACAACCCGACGATTGCTCCGTATGCAA
AAGAATTTGAAGTAACGCTGCGGATTACGGCGAGGGCCTCAACGGCAGAAGAAGGAGAAGCCTTGATTTTGCCGGTCGAG
GAGGAGATTCGCAAGCGCGTTGGCGAGTATGTGTACGGGATGGGGGAGGATTCTTCCCTGCACGATGTATTGGTAAGCGA
ACTGAAAAAGCGAAACGAGACCATCGCATGTGCAGAGAGCTGTACAGGCGGCACGATCGCTTCGCTCATTACTTCCGTTC
CTGGCAGTTCGTCTGTTTTCCAAGGAGGCATCGTTTGCTATACAAACGATGTGAAAAACCAGCTGCTCGACGTGCCTGAA
GAAGTGTTGTCCACAGACGGCGCAGTCAGCCGCCAGACAGCGCAGCTGCTTGCGGAGAATGTACGAGCCAAGCTGGGAGC
CACATACGGAGTTTCCGTGACGGGTGTGGCTGGTCCCGATCCATCGGAAGGCAAGCCTGTAGGTCTTGTCTACGTAGGGA
TTGCGGGTGAAGGGATGCCAACAGTAGTCAAAGAGCTTCGCCTTGCAGGCAGAAGAAAGGCGATTGTTGGGCGTGCCGCC
AAATTTGCGCTATTTTATGCGCTGCAAATGCAAAAAGAAAGGTGA
ATGAGAGCGGAGATTATCGCAGTAGGTACCGAGCTTTTGCTAGGCCAGATTGCCAACACCAATGCTCAGTTTCTCTCGCA
AAAACTGGCGGAAATTGGTGTCGGAGTGTATTTTCATTCCGTTGTCGGCGATAACACGCAGCGGTTGCAGCAGGTGATCG
CCCTCGCAGCCGACCGTTCCGATCTTGTCATTTTTACGGGTGGGCTTGGACCGACTCAGGATGACCTGACAAAAGAAACA
GTGGCAGGGCACGTGGGCGTCGGACTGGAGACAAATCCGGAAGCCATGGAAAGAATTGAACAATTCTTTTTGCAACGTGG
GATTGTCATGACGGAAAACAATCGGAAGCAGGCGCTGGTTCTCTCAGGCAGCCATGTCTTCCCCAATGACTTCGGGATGG
CGCCTGGGATGGCGATCCGTCATGACAGTTGCACGTTCGTGCTTCTCCCTGGACCGCCTAGCGAGCTGTACCCGATGGTG
GAGCATTACGTCATGCCGTACTTGACGGATCTGTTGCCGGAGAAGCGAGTATTTCATTCTCATGTGCTGCGTTTCTACGG
GATCGGTGAGTCTGCTCTGGAGGAGCGGTTGCTGGATCTGATTGAAAAACAGGACAACCCGACGATTGCTCCGTATGCAA
AAGAATTTGAAGTAACGCTGCGGATTACGGCGAGGGCCTCAACGGCAGAAGAAGGAGAAGCCTTGATTTTGCCGGTCGAG
GAGGAGATTCGCAAGCGCGTTGGCGAGTATGTGTACGGGATGGGGGAGGATTCTTCCCTGCACGATGTATTGGTAAGCGA
ACTGAAAAAGCGAAACGAGACCATCGCATGTGCAGAGAGCTGTACAGGCGGCACGATCGCTTCGCTCATTACTTCCGTTC
CTGGCAGTTCGTCTGTTTTCCAAGGAGGCATCGTTTGCTATACAAACGATGTGAAAAACCAGCTGCTCGACGTGCCTGAA
GAAGTGTTGTCCACAGACGGCGCAGTCAGCCGCCAGACAGCGCAGCTGCTTGCGGAGAATGTACGAGCCAAGCTGGGAGC
CACATACGGAGTTTCCGTGACGGGTGTGGCTGGTCCCGATCCATCGGAAGGCAAGCCTGTAGGTCTTGTCTACGTAGGGA
TTGCGGGTGAAGGGATGCCAACAGTAGTCAAAGAGCTTCGCCTTGCAGGCAGAAGAAAGGCGATTGTTGGGCGTGCCGCC
AAATTTGCGCTATTTTATGCGCTGCAAATGCAAAAAGAAAGGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
50.847 |
99.758 |
0.507 |
| cinA | Streptococcus mitis SK321 |
47.215 |
99.758 |
0.471 |
| cinA | Streptococcus mitis NCTC 12261 |
47.215 |
99.758 |
0.471 |
| cinA | Streptococcus pneumoniae TIGR4 |
46.731 |
99.758 |
0.466 |
| cinA | Streptococcus pneumoniae Rx1 |
46.489 |
99.758 |
0.464 |
| cinA | Streptococcus pneumoniae R6 |
46.489 |
99.758 |
0.464 |
| cinA | Streptococcus pneumoniae D39 |
46.247 |
99.758 |
0.461 |
| cinA | Streptococcus mutans UA159 |
44.612 |
96.377 |
0.43 |
| cinA | Streptococcus suis isolate S10 |
39.747 |
95.411 |
0.379 |