Detailed information NTG0495404

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM07_RS28375
• Genome accession: NZ_CP074921
• Coordinates: 5508499..5509482 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 07_3986
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5503499..5514482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM07_RS28345 (KIM07_27990)	-	5504165..5504272 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM07_RS28350 (KIM07_27995)	-	5504648..5504755 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM07_RS28355 (KIM07_28000)	-	5505131..5505238 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM07_RS28360 (KIM07_28005)	-	5505614..5505721 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM07_RS28365 (KIM07_28010)	yhjV	5506197..5507468 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM07_RS28370 (KIM07_28015)	dppF	5507498..5508502 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM07_RS28375 (KIM07_28020)	amiE	5508499..5509482 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM07_RS28380 (KIM07_28025)	dppC	5509493..5510395 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM07_RS28385 (KIM07_28030)	dppB	5510405..5511424 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM07_RS28390 (KIM07_28035)	dppA	5511575..5513182 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=495404 KIM07_RS28375 WP_001196495.1 5508499..5509482(-) (amiE) [Escherichia coli strain 07_3986]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=495404 KIM07_RS28375 WP_001196495.1 5508499..5509482(-) (amiE) [Escherichia coli strain 07_3986]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401