Detailed information NTG0481862

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: D8K17_RS11450
• Genome accession: NZ_CP061322
• Coordinates: 2248088..2248357 (-)
• Length: 89 a.a.
• NCBI ID: WP_023349160.1
• Uniprot ID: A0AB35KDE0
• Organism: Lactococcus lactis subsp. lactis bv. diacetylactis strain S50
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2243088..2253357

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D8K17_RS11410 (D8K17_011430)	-	2243624..2244433 (-)	810	WP_010906310.1	metal ABC transporter permease	-
D8K17_RS11415 (D8K17_011435)	-	2244426..2245163 (-)	738	WP_010906311.1	metal ABC transporter ATP-binding protein	-
D8K17_RS11420 (D8K17_011440)	-	2245340..2246182 (-)	843	WP_010906312.1	metal ABC transporter substrate-binding protein	-
D8K17_RS11425 (D8K17_011445)	-	2246179..2246616 (-)	438	WP_010906313.1	zinc-dependent MarR family transcriptional regulator	-
D8K17_RS11430 (D8K17_011450)	comGG	2246697..2246981 (-)	285	WP_010906314.1	competence type IV pilus minor pilin ComGG	Machinery gene
D8K17_RS11435 (D8K17_011455)	comGF	2247020..2247466 (-)	447	WP_031296844.1	competence type IV pilus minor pilin ComGF	Machinery gene
D8K17_RS11440 (D8K17_011460)	comGE	2247429..2247725 (-)	297	WP_010906316.1	competence type IV pilus minor pilin ComGE	Machinery gene
D8K17_RS11445 (D8K17_011465)	comGD	2247697..2248113 (-)	417	WP_021216554.1	competence type IV pilus minor pilin ComGD	Machinery gene
D8K17_RS11450 (D8K17_011470)	comGC	2248088..2248357 (-)	270	WP_023349160.1	competence type IV pilus major pilin ComGC	Machinery gene
D8K17_RS11455 (D8K17_011475)	-	2248504..2249028 (-)	525	WP_014570795.1	GNAT family N-acetyltransferase	-
D8K17_RS11460 (D8K17_011480)	-	2249107..2249886 (-)	780	WP_058147788.1	peptidoglycan amidohydrolase family protein	-
D8K17_RS11465 (D8K17_011485)	-	2249886..2250185 (-)	300	WP_031559226.1	phage holin	-
D8K17_RS11470 (D8K17_011490)	-	2250198..2250548 (-)	351	WP_023349296.1	hypothetical protein	-
D8K17_RS14055	-	2250568..2252148 (-)	1581	WP_223203828.1	hypothetical protein	-
D8K17_RS11480 (D8K17_011500)	-	2252126..2252299 (-)	174	WP_032941620.1	hypothetical protein	-

Sequence

Protein

• Length: 89 a.a.
• Molecular weight: 10113.52 Da
• Isoelectric Point: 4.2950

>NTDB_id=481862 D8K17_RS11450 WP_023349160.1 2248088..2248357(-) (comGC) [Lactococcus lactis subsp. lactis bv. diacetylactis strain S50]
MLIVLAIISILILLFVPNLIKEKSQVQKTGEAAVVKVVESQAQLYELDHDDEKPSLSELLSAGMITQKQISAYDNYYDQN
KNEERNFND

Nucleotide

• Length: 270 bp

>NTDB_id=481862 D8K17_RS11450 WP_023349160.1 2248088..2248357(-) (comGC) [Lactococcus lactis subsp. lactis bv. diacetylactis strain S50]
ATGTTAATTGTACTAGCTATTATTAGTATTTTGATATTACTATTTGTTCCAAATTTAATTAAAGAAAAATCACAAGTTCA
AAAAACTGGAGAAGCGGCAGTTGTCAAAGTAGTAGAAAGTCAAGCTCAACTTTATGAATTAGATCATGATGATGAGAAGC
CGAGTCTGTCAGAATTGCTCAGTGCAGGGATGATTACTCAAAAACAAATTTCTGCTTACGATAATTACTATGATCAGAAT
AAAAATGAAGAACGAAATTTTAATGACTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Lactococcus lactis subsp. cremoris KW2	88	84.27	0.742
comYC	Streptococcus gordonii str. Challis substr. CH1	57.647	95.506	0.551
comGC/cglC	Streptococcus pneumoniae Rx1	55.056	100	0.551
comGC/cglC	Streptococcus pneumoniae D39	55.056	100	0.551
comGC/cglC	Streptococcus pneumoniae R6	55.056	100	0.551
comGC/cglC	Streptococcus pneumoniae TIGR4	55.056	100	0.551
comYC	Streptococcus suis isolate S10	58.904	82.022	0.483
comGC/cglC	Streptococcus mitis SK321	55.263	85.393	0.472
comYC	Streptococcus mutans UA140	52.055	82.022	0.427
comYC	Streptococcus mutans UA159	52.055	82.022	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	57.812	71.91	0.416