Detailed information NTG0481674

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AOC19_RS08530
• Genome accession: NZ_CP061297
• Coordinates: 1700619..1701509 (+)
• Length: 296 a.a.
• NCBI ID: WP_215376010.1
• Uniprot ID: -
• Organism: Polynucleobacter asymbioticus strain MWH-MoIso1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1695619..1706509

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOC19_RS08500 (AOC19_08505)	pth	1695768..1696364 (+)	597	WP_215375998.1	aminoacyl-tRNA hydrolase	-
AOC19_RS08505 (AOC19_08510)	-	1696394..1696663 (-)	270	WP_215376001.1	YfhL family 4Fe-4S dicluster ferredoxin	-
AOC19_RS08510 (AOC19_08515)	coaD	1696682..1697179 (-)	498	WP_215376004.1	pantetheine-phosphate adenylyltransferase	-
AOC19_RS08515 (AOC19_08520)	rsmD	1697216..1697845 (-)	630	WP_215378252.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AOC19_RS08520 (AOC19_08525)	-	1697838..1699184 (-)	1347	WP_251368019.1	pitrilysin family protein	-
AOC19_RS08525 (AOC19_08530)	-	1699171..1700556 (-)	1386	WP_215376007.1	pitrilysin family protein	-
AOC19_RS08530 (AOC19_08535)	pilA	1700619..1701509 (+)	891	WP_215376010.1	signal recognition particle-docking protein FtsY	Machinery gene
AOC19_RS08535 (AOC19_08540)	rpoH	1701603..1702544 (+)	942	WP_215376012.1	RNA polymerase sigma factor RpoH	-
AOC19_RS08540 (AOC19_08545)	-	1702564..1703127 (-)	564	WP_251368105.1	SCO family protein	-
AOC19_RS08545 (AOC19_08550)	cyoE	1703177..1704070 (-)	894	WP_215376018.1	heme o synthase	-
AOC19_RS08550 (AOC19_08555)	-	1704067..1705197 (-)	1131	WP_215376021.1	COX15/CtaA family protein	-
AOC19_RS08555 (AOC19_08560)	-	1705194..1705853 (-)	660	WP_215376024.1	hypothetical protein	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 31527.29 Da
• Isoelectric Point: 7.1193

>NTDB_id=481674 AOC19_RS08530 WP_215376010.1 1700619..1701509(+) (pilA) [Polynucleobacter asymbioticus strain MWH-MoIso1]
MFGLRKTLGSLFKSNQTDEAWFDALEESLILSDVGLPTTEQLISKLRKAAKSEKASSPEDLKQLLIQEVASLLQPLEPKP
NPLYVHDQKTMPEVWLVIGVNGAGKTTTIGKLCKLFQSQGKSVLLAAGDTFRAAARNQLLEWGGRNQVDVIMQESGDAAA
VAHDAIHAAISRKSDILIIDTAGRLATQDHLMEELKKVKRVIGKALPGAPHQTLLVLDGNTGQNGLSQVKAFHAALGLSA
LIVTKLDGTAKGGVICALAHTLNDGPKPAVLALGKGEGIDDLAPFTATQYSSELFN

Nucleotide

• Length: 891 bp

>NTDB_id=481674 AOC19_RS08530 WP_215376010.1 1700619..1701509(+) (pilA) [Polynucleobacter asymbioticus strain MWH-MoIso1]
ATGTTCGGCCTACGTAAAACCCTCGGATCCCTATTCAAATCCAATCAGACTGATGAAGCCTGGTTTGATGCCCTAGAAGA
ATCGCTCATTCTGAGTGATGTGGGCCTACCCACGACCGAACAACTGATCAGCAAACTTCGTAAGGCTGCCAAATCAGAAA
AGGCTAGTAGCCCCGAAGACTTGAAGCAACTACTCATTCAAGAGGTGGCAAGTCTTCTGCAGCCTTTGGAGCCAAAGCCC
AATCCTTTGTACGTGCATGATCAAAAGACCATGCCAGAGGTGTGGCTAGTTATCGGCGTCAATGGTGCAGGCAAGACCAC
CACTATCGGCAAGCTGTGCAAACTCTTTCAGTCGCAAGGCAAATCCGTCTTGCTAGCAGCCGGAGATACTTTCCGTGCAG
CAGCTCGTAATCAACTCCTGGAATGGGGTGGTCGCAATCAAGTGGACGTCATCATGCAAGAGAGTGGTGATGCTGCAGCG
GTCGCGCATGATGCTATTCATGCGGCGATTTCCCGTAAGAGCGACATACTGATTATTGATACTGCTGGAAGGCTCGCGAC
TCAAGACCATCTCATGGAAGAGTTGAAGAAGGTTAAAAGAGTCATCGGCAAGGCCCTTCCCGGGGCGCCTCACCAGACTT
TGCTCGTTCTTGATGGCAATACCGGTCAAAACGGTTTAAGCCAGGTAAAAGCCTTTCATGCCGCTTTAGGGCTTTCCGCT
TTAATCGTGACTAAATTGGATGGTACCGCTAAGGGCGGGGTTATCTGCGCCCTCGCCCACACCCTGAATGATGGGCCAAA
ACCCGCAGTTTTAGCCCTAGGCAAAGGTGAAGGAATTGACGATTTGGCCCCCTTCACTGCCACCCAATATTCTTCTGAAT
TATTCAATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (92-295)

• SRP54-type protein, helical bundle domain (SRP54_N) (4-68)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.242	98.986	0.527