Detailed information NTG0481431

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: D39N_RS09305
• Genome accession: NZ_CP061208
• Coordinates: 1840816..1841220 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588026.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain D39_P0
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1835816..1846220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D39N_RS09270 (D39N_01860)	rnpA	1836230..1836601 (-)	372	WP_000739246.1	ribonuclease P protein component	-
D39N_RS10860	-	1836618..1836749 (-)	132	WP_000768904.1	hypothetical protein	-
D39N_RS09275 (D39N_01861)	-	1836750..1837940 (-)	1191	WP_000167757.1	acetate kinase	-
D39N_RS09280 (D39N_01862)	comYH	1837991..1838944 (-)	954	WP_000345135.1	class I SAM-dependent methyltransferase	Machinery gene
D39N_RS09285	-	1839005..1839599 (-)	595	Protein_1833	methyltransferase domain-containing protein	-
D39N_RS09290 (D39N_01865)	comGG/cglG	1839736..1840149 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
D39N_RS09295 (D39N_01866)	comGF/cglF	1840127..1840588 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
D39N_RS09300 (D39N_01867)	comGE/cglE	1840551..1840853 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
D39N_RS09305 (D39N_01868)	comGD/cglD	1840816..1841220 (-)	405	WP_000588026.1	competence type IV pilus minor pilin ComGD	Machinery gene
D39N_RS09310 (D39N_01869)	comGC/cglC	1841213..1841539 (-)	327	WP_000738626.1	comG operon protein ComGC	Machinery gene
D39N_RS09315 (D39N_01870)	comGB/cglB	1841541..1842557 (-)	1017	WP_074196785.1	competence type IV pilus assembly protein ComGB	Machinery gene
D39N_RS09320 (D39N_01871)	comGA/cglA/cilD	1842505..1843446 (-)	942	WP_000249564.1	competence type IV pilus ATPase ComGA	Machinery gene
D39N_RS09325 (D39N_01872)	-	1843522..1843887 (-)	366	WP_000286412.1	DUF1033 family protein	-
D39N_RS09330 (D39N_01873)	-	1844038..1845096 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14684.91 Da
• Isoelectric Point: 10.2164

>NTDB_id=481431 D39N_RS09305 WP_000588026.1 1840816..1841220(-) (comGD/cglD) [Streptococcus pneumoniae strain D39_P0]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=481431 D39N_RS09305 WP_000588026.1 1840816..1841220(-) (comGD/cglD) [Streptococcus pneumoniae strain D39_P0]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTTCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCTAGTCAACAAAAGACTAGTTTGAACTTGGATGGGCAGATGATTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae Rx1	100	100	1
comGD/cglD	Streptococcus pneumoniae D39	100	100	1
comGD/cglD	Streptococcus pneumoniae R6	100	100	1
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47