Detailed information NTG0047589

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: CVCAS_RS10720
• Genome accession: NC_017486
• Coordinates: 2144795..2145064 (-)
• Length: 89 a.a.
• NCBI ID: WP_003129998.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis CV56
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2139795..2150064

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CVCAS_RS10680 (CVCAS_2097)	-	2140321..2141130 (-)	810	WP_014570791.1	metal ABC transporter permease	-
CVCAS_RS10685 (CVCAS_2098)	-	2141123..2141860 (-)	738	WP_003129989.1	metal ABC transporter ATP-binding protein	-
CVCAS_RS10690 (CVCAS_2099)	-	2142037..2142879 (-)	843	WP_003129990.1	metal ABC transporter substrate-binding protein	-
CVCAS_RS10695 (CVCAS_2100)	-	2142876..2143313 (-)	438	WP_003129992.1	zinc-dependent MarR family transcriptional regulator	-
CVCAS_RS10700 (CVCAS_2101)	comGG	2143395..2143688 (-)	294	WP_043991170.1	competence type IV pilus minor pilin ComGG	Machinery gene
CVCAS_RS10705 (CVCAS_2102)	comGF	2143727..2144173 (-)	447	WP_029344525.1	competence type IV pilus minor pilin ComGF	Machinery gene
CVCAS_RS10710 (CVCAS_2103)	comGE	2144136..2144432 (-)	297	WP_010906316.1	competence type IV pilus minor pilin ComGE	Machinery gene
CVCAS_RS10715 (CVCAS_2104)	comGD	2144404..2144835 (-)	432	WP_014570794.1	competence type IV pilus minor pilin ComGD	Machinery gene
CVCAS_RS10720 (CVCAS_2105)	comGC	2144795..2145064 (-)	270	WP_003129998.1	competence type IV pilus major pilin ComGC	Machinery gene
CVCAS_RS10725 (CVCAS_2106)	-	2145211..2145735 (-)	525	WP_014570795.1	GNAT family N-acetyltransferase	-
CVCAS_RS10730 (CVCAS_2107)	-	2145814..2146593 (-)	780	WP_014570796.1	peptidoglycan amidohydrolase family protein	-
CVCAS_RS10735 (CVCAS_2108)	-	2146593..2146892 (-)	300	WP_014570797.1	phage holin	-
CVCAS_RS10740 (CVCAS_2109)	-	2146905..2147255 (-)	351	WP_014570798.1	hypothetical protein	-
CVCAS_RS10745 (CVCAS_2110)	-	2147268..2147504 (-)	237	WP_014570799.1	hypothetical protein	-

Sequence

Protein

• Length: 89 a.a.
• Molecular weight: 10123.56 Da
• Isoelectric Point: 4.2950

>NTDB_id=47589 CVCAS_RS10720 WP_003129998.1 2144795..2145064(-) (comGC) [Lactococcus lactis subsp. lactis CV56]
MLIVLAIISILILLFVPNLIKEKSQVQKTGEAAVVKVVESQAQLYELDHDDEKPSLPELLSAGMITQKQISAYDNYYDQN
KNEERNFND

Nucleotide

• Length: 270 bp

>NTDB_id=47589 CVCAS_RS10720 WP_003129998.1 2144795..2145064(-) (comGC) [Lactococcus lactis subsp. lactis CV56]
ATGTTAATTGTACTAGCTATTATTAGTATTTTAATATTACTATTTGTTCCAAATTTAATTAAAGAAAAATCACAAGTTCA
AAAAACTGGAGAAGCGGCAGTTGTAAAAGTAGTAGAAAGTCAAGCTCAACTTTATGAATTAGATCATGATGATGAGAAGC
CGAGTCTGCCAGAATTGCTCAGCGCTGGGATGATTACTCAAAAACAAATTTCTGCTTACGATAATTACTATGATCAGAAC
AAAAATGAAGAACGAAATTTTAATGACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Lactococcus lactis subsp. cremoris KW2	86.667	84.27	0.73
comGC/cglC	Streptococcus pneumoniae Rx1	55.056	100	0.551
comGC/cglC	Streptococcus pneumoniae D39	55.056	100	0.551
comGC/cglC	Streptococcus pneumoniae R6	55.056	100	0.551
comGC/cglC	Streptococcus pneumoniae TIGR4	55.056	100	0.551
comYC	Streptococcus gordonii str. Challis substr. CH1	56.471	95.506	0.539
comYC	Streptococcus suis isolate S10	58.904	82.022	0.483
comGC/cglC	Streptococcus mitis SK321	53.947	85.393	0.461
comYC	Streptococcus mutans UA140	50.685	82.022	0.416
comYC	Streptococcus mutans UA159	50.685	82.022	0.416
comGC/cglC	Streptococcus mitis NCTC 12261	56.25	71.91	0.404