Detailed information NTG0473843

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: LLUL021_RS11515
• Genome accession: NZ_CP070263
• Coordinates: 2264567..2264863 (-)
• Length: 98 a.a.
• NCBI ID: WP_212715809.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain UL021
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2259567..2269863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUL021_RS11475 (LLUL021_11435)	-	2260094..2260903 (-)	810	WP_014570791.1	metal ABC transporter permease	-
LLUL021_RS11480 (LLUL021_11440)	-	2260896..2261633 (-)	738	WP_058221575.1	metal ABC transporter ATP-binding protein	-
LLUL021_RS11485 (LLUL021_11445)	-	2261810..2262652 (-)	843	WP_003129990.1	metal ABC transporter substrate-binding protein	-
LLUL021_RS11490 (LLUL021_11450)	-	2262649..2263086 (-)	438	WP_003129992.1	zinc-dependent MarR family transcriptional regulator	-
LLUL021_RS11495 (LLUL021_11455)	comGG	2263176..2263460 (-)	285	WP_003129993.1	competence type IV pilus minor pilin ComGG	Machinery gene
LLUL021_RS11500 (LLUL021_11460)	comGF	2263499..2263945 (-)	447	WP_029344525.1	competence type IV pilus minor pilin ComGF	Machinery gene
LLUL021_RS11505 (LLUL021_11465)	comGE	2263908..2264204 (-)	297	WP_010906316.1	competence type IV pilus minor pilin ComGE	Machinery gene
LLUL021_RS11510 (LLUL021_11470)	comGD	2264176..2264607 (-)	432	WP_080585155.1	competence type IV pilus minor pilin ComGD	Machinery gene
LLUL021_RS11515 (LLUL021_11475)	comGC	2264567..2264863 (-)	297	WP_212715809.1	competence type IV pilus major pilin ComGC	Machinery gene
LLUL021_RS11520 (LLUL021_11480)	-	2265025..2265804 (-)	780	WP_137016631.1	peptidoglycan amidohydrolase family protein	-
LLUL021_RS11525 (LLUL021_11485)	-	2265804..2266091 (-)	288	WP_137016629.1	phage holin	-
LLUL021_RS11530 (LLUL021_11490)	-	2266104..2266454 (-)	351	WP_014570798.1	hypothetical protein	-
LLUL021_RS11535 (LLUL021_11495)	-	2266467..2266703 (-)	237	WP_137016624.1	hypothetical protein	-

Sequence

Protein

• Length: 98 a.a.
• Molecular weight: 11157.84 Da
• Isoelectric Point: 4.2213

>NTDB_id=473843 LLUL021_RS11515 WP_212715809.1 2264567..2264863(-) (comGC) [Lactococcus lactis subsp. lactis strain UL021]
MSFLVTLIEMLIVLAIISILILLFVPNLIKEKSQVQKTGEAAVVKVVESQAQLYELDHDDEKPSLPELLSAGMITQKQIS
AYDNYYDQNKNEERNFND

Nucleotide

• Length: 297 bp

>NTDB_id=473843 LLUL021_RS11515 WP_212715809.1 2264567..2264863(-) (comGC) [Lactococcus lactis subsp. lactis strain UL021]
ATGAGTTTTTTAGTTACCTTAATTGAGATGTTAATTGTACTAGCTATTATTAGTATTTTAATATTACTATTTGTTCCAAA
TTTAATTAAAGAAAAATCACAAGTTCAAAAAACTGGAGAAGCGGCAGTTGTAAAAGTAGTAGAAAGTCAAGCTCAACTTT
ATGAATTAGATCATGATGATGAGAAGCCGAGTCTGCCAGAATTGCTCAGCGCTGGGATGATTACTCAAAAACAAATTTCT
GCTTACGATAATTACTATGATCAGAACAAAAATGAAGAACGAAATTTTAATGACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Lactococcus lactis subsp. cremoris KW2	89.247	94.898	0.847
comGC/cglC	Streptococcus mitis SK321	53.333	100	0.571
comGC/cglC	Streptococcus pneumoniae D39	55.914	94.898	0.531
comGC/cglC	Streptococcus pneumoniae R6	55.914	94.898	0.531
comGC/cglC	Streptococcus pneumoniae TIGR4	55.914	94.898	0.531
comGC/cglC	Streptococcus pneumoniae Rx1	55.914	94.898	0.531
comGC	Streptococcus mutans UA140	56.667	91.837	0.52
comGC	Streptococcus mutans UA159	56.667	91.837	0.52
comGC/cglC	Streptococcus mitis NCTC 12261	54.839	94.898	0.52
comGC	Streptococcus gordonii str. Challis substr. CH1	57.303	90.816	0.52
comGC	Streptococcus suis isolate S10	59.74	78.571	0.469