Detailed information NTG0471292

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: H3V22_RS02700
• Genome accession: NZ_CP059679
• Coordinates: 545588..545905 (-)
• Length: 105 a.a.
• NCBI ID: WP_070045385.1
• Uniprot ID: A0AAX3W128
• Organism: Mammaliicoccus lentus strain H29
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 540588..550905

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H3V22_RS02670 (H3V22_02670)	gcvT	541154..542242 (-)	1089	WP_017000244.1	glycine cleavage system aminomethyltransferase GcvT	-
H3V22_RS02675 (H3V22_02675)	-	542405..542923 (-)	519	WP_064205405.1	shikimate kinase	-
H3V22_RS02680 (H3V22_02680)	-	543189..544361 (-)	1173	WP_000195429.1	IS256-like element IS256 family transposase	-
H3V22_RS02685 (H3V22_02685)	-	544579..544887 (-)	309	WP_239747373.1	hypothetical protein	-
H3V22_RS02690 (H3V22_02690)	comGE	544901..545173 (-)	273	WP_228082628.1	competence type IV pilus minor pilin ComGE	-
H3V22_RS02695 (H3V22_02695)	comGD	545160..545588 (-)	429	WP_017000239.1	competence type IV pilus minor pilin ComGD	-
H3V22_RS02700 (H3V22_02700)	comGC	545588..545905 (-)	318	WP_070045385.1	competence type IV pilus major pilin ComGC	Machinery gene
H3V22_RS02705 (H3V22_02705)	-	545923..546648 (-)	726	WP_182093960.1	type II secretion system F family protein	-
H3V22_RS02710 (H3V22_02710)	-	546658..546957 (-)	300	WP_182093961.1	hypothetical protein	-
H3V22_RS02715 (H3V22_02715)	comGA	546957..547853 (-)	897	WP_182093962.1	ATPase, T2SS/T4P/T4SS family	Machinery gene
H3V22_RS02720 (H3V22_02720)	-	548006..548254 (+)	249	WP_017000234.1	DUF2626 family protein	-
H3V22_RS02725 (H3V22_02725)	-	548319..548951 (-)	633	WP_017000233.1	MBL fold metallo-hydrolase	-
H3V22_RS02730 (H3V22_02730)	-	549049..549288 (+)	240	WP_017000232.1	DUF2759 domain-containing protein	-
H3V22_RS02735 (H3V22_02735)	-	549317..549631 (-)	315	WP_017000231.1	MTH1187 family thiamine-binding protein	-
H3V22_RS02740 (H3V22_02740)	-	549631..550602 (-)	972	WP_103268827.1	ROK family glucokinase	-
H3V22_RS02745 (H3V22_02745)	-	550599..550790 (-)	192	WP_017000229.1	YqgQ family protein	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11590.66 Da
• Isoelectric Point: 7.8266

>NTDB_id=471292 H3V22_RS02700 WP_070045385.1 545588..545905(-) (comGC) [Mammaliicoccus lentus strain H29]
MKNIKFFKKEEGFTLIEMLIVLLIISILLIIIIPNISKQSETVKSTGCQAQVKMVAGQVEAYTLKHDAKPNSINDLVSDG
FIKENQLTCKSGQNIVLNNGEVVAQ

Nucleotide

• Length: 318 bp

>NTDB_id=471292 H3V22_RS02700 WP_070045385.1 545588..545905(-) (comGC) [Mammaliicoccus lentus strain H29]
ATGAAAAATATAAAGTTTTTTAAAAAAGAAGAAGGCTTCACGTTGATTGAGATGTTAATCGTATTATTAATTATAAGTAT
TTTACTTATAATTATAATCCCTAACATAAGCAAGCAGTCTGAAACCGTGAAAAGTACTGGTTGTCAGGCACAAGTTAAAA
TGGTTGCTGGCCAAGTAGAAGCATATACATTAAAACACGATGCTAAGCCAAATTCAATTAATGATTTAGTAAGTGATGGG
TTCATAAAAGAGAATCAATTGACTTGTAAATCTGGTCAGAACATTGTTTTAAATAACGGAGAAGTAGTAGCTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	66.337	96.19	0.638
comGC	Staphylococcus aureus N315	66.337	96.19	0.638
comGC	Bacillus subtilis subsp. subtilis str. 168	46.237	88.571	0.41
comGC/cglC	Streptococcus mitis NCTC 12261	40.952	100	0.41
comGC/cglC	Streptococcus mitis SK321	43.299	92.381	0.4
comGC/cglC	Streptococcus pneumoniae R6	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae TIGR4	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae Rx1	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae D39	44.828	82.857	0.371
comYC	Streptococcus mutans UA159	50.649	73.333	0.371
comYC	Streptococcus mutans UA140	50.649	73.333	0.371
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	78.095	0.362