Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | THTHE16_RS02275 | Genome accession | NC_017272 |
| Coordinates | 410742..411656 (-) | Length | 304 a.a. |
| NCBI ID | WP_014509928.1 | Uniprot ID | F6DE37 |
| Organism | Thermus thermophilus SG0.5JP17-16 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 405742..416656
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THTHE16_RS02245 (Ththe16_0430) | hisH | 406326..406922 (+) | 597 | WP_014509923.1 | imidazole glycerol phosphate synthase subunit HisH | - |
| THTHE16_RS02250 (Ththe16_0431) | - | 406893..407813 (-) | 921 | WP_008631682.1 | carbohydrate kinase family protein | - |
| THTHE16_RS02255 (Ththe16_0432) | guaB | 407958..409439 (+) | 1482 | WP_008631683.1 | IMP dehydrogenase | - |
| THTHE16_RS02260 (Ththe16_0433) | - | 409445..409675 (-) | 231 | WP_014509924.1 | hypothetical protein | - |
| THTHE16_RS02265 (Ththe16_0434) | - | 409716..410201 (+) | 486 | WP_014509925.1 | hypothetical protein | - |
| THTHE16_RS02270 (Ththe16_0435) | - | 410146..410559 (-) | 414 | WP_014509926.1 | disulfide bond formation protein B | - |
| THTHE16_RS12910 (Ththe16_0436) | - | 410590..410745 (+) | 156 | WP_014509927.1 | DUF5522 domain-containing protein | - |
| THTHE16_RS02275 (Ththe16_0437) | pilA | 410742..411656 (-) | 915 | WP_014509928.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| THTHE16_RS02280 (Ththe16_0438) | - | 411656..412096 (-) | 441 | WP_008631688.1 | hypothetical protein | - |
| THTHE16_RS02285 (Ththe16_0439) | gltX | 412114..413520 (-) | 1407 | WP_008631689.1 | glutamate--tRNA ligase | - |
| THTHE16_RS02290 (Ththe16_0440) | lptB | 413575..414303 (+) | 729 | WP_008631690.1 | LPS export ABC transporter ATP-binding protein | - |
| THTHE16_RS02295 (Ththe16_0441) | - | 414306..415649 (+) | 1344 | WP_014509929.1 | DUF3084 domain-containing protein | - |
| THTHE16_RS02300 (Ththe16_0442) | prmC | 415548..416444 (-) | 897 | WP_008631692.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
Sequence
Protein
Download Length: 304 a.a. Molecular weight: 32845.27 Da Isoelectric Point: 9.4243
>NTDB_id=45771 THTHE16_RS02275 WP_014509928.1 410742..411656(-) (pilA) [Thermus thermophilus SG0.5JP17-16]
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPKGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPV
IQGPEGADPAALAFDAAQARRARGLDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPDEPGEVWLVLDAITGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEG
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPKGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPV
IQGPEGADPAALAFDAAQARRARGLDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPDEPGEVWLVLDAITGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEG
Nucleotide
Download Length: 915 bp
>NTDB_id=45771 THTHE16_RS02275 WP_014509928.1 410742..411656(-) (pilA) [Thermus thermophilus SG0.5JP17-16]
ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA
CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA
AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAGGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG
CGGCGGGCCACGCTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTAAGGGGCACGTGGTGATGGT
GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC
TCTTCTGCGCCGGGGACACCTTCCGCGCCGCAGGGGGAGCCCAGCTCGCGGAGTGGGGGAAGCGCCTCGGGATCCCGGTG
ATCCAGGGCCCCGAGGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCCAGGCCCGAAGGGCGCGGGGCTTGGACCT
CCTTTTCGTGGACACCGCCGGGCGGCTCCACACCAAGCACAACCTCATGGAGGAGCTGAAGAAGGTGAAGCGGGCCATCG
CCAAGGCAGATCCAGACGAGCCAGGAGAGGTCTGGCTGGTACTGGACGCCATTACCGGGCAAAACGGCCTCGAGCAGGCC
AAGCGCTTTCACGAGGCCGTGGGCCTCACTGGGGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT
CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGAGAAGGCCCGGACGACCTCCAGCCCTTTGACG
CCGAGGCCTTCGTGGAGGCCCTCCTCGAGGGCTAA
ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA
CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA
AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAGGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG
CGGCGGGCCACGCTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTAAGGGGCACGTGGTGATGGT
GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC
TCTTCTGCGCCGGGGACACCTTCCGCGCCGCAGGGGGAGCCCAGCTCGCGGAGTGGGGGAAGCGCCTCGGGATCCCGGTG
ATCCAGGGCCCCGAGGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCCAGGCCCGAAGGGCGCGGGGCTTGGACCT
CCTTTTCGTGGACACCGCCGGGCGGCTCCACACCAAGCACAACCTCATGGAGGAGCTGAAGAAGGTGAAGCGGGCCATCG
CCAAGGCAGATCCAGACGAGCCAGGAGAGGTCTGGCTGGTACTGGACGCCATTACCGGGCAAAACGGCCTCGAGCAGGCC
AAGCGCTTTCACGAGGCCGTGGGCCTCACTGGGGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT
CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGAGAAGGCCCGGACGACCTCCAGCCCTTTGACG
CCGAGGCCTTCGTGGAGGCCCTCCTCGAGGGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
48.726 |
100 |
0.503 |