Detailed information
Bioinformatically predicted
Overview
| Name | pilC | Type | Machinery gene |
| Locus tag | G3T16_RS15725 | Genome accession | NZ_CP048711 |
| Coordinates | 3537797..3539014 (-) | Length | 405 a.a. |
| NCBI ID | WP_163496056.1 | Uniprot ID | A0A6C0U380 |
| Organism | Kineobactrum salinum strain M2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3532797..3544014
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3T16_RS15705 (G3T16_15705) | argJ | 3534674..3535899 (+) | 1226 | Protein_3197 | bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ | - |
| G3T16_RS15710 (G3T16_15710) | mutT | 3535900..3536298 (+) | 399 | WP_163496053.1 | 8-oxo-dGTP diphosphatase MutT | - |
| G3T16_RS15715 (G3T16_15715) | coaE | 3536306..3536920 (-) | 615 | WP_163496054.1 | dephospho-CoA kinase | - |
| G3T16_RS15720 (G3T16_15720) | pilD | 3536917..3537786 (-) | 870 | WP_163496055.1 | A24 family peptidase | Machinery gene |
| G3T16_RS15725 (G3T16_15725) | pilC | 3537797..3539014 (-) | 1218 | WP_163496056.1 | type II secretion system F family protein | Machinery gene |
| G3T16_RS15730 (G3T16_15730) | pilB | 3539068..3540786 (-) | 1719 | WP_163496057.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| G3T16_RS15735 (G3T16_15735) | - | 3541268..3541720 (+) | 453 | WP_408610710.1 | pilin | - |
| G3T16_RS15740 (G3T16_15740) | - | 3541868..3543781 (+) | 1914 | WP_163496058.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 405 a.a. Molecular weight: 43383.81 Da Isoelectric Point: 9.7820
>NTDB_id=422459 G3T16_RS15725 WP_163496056.1 3537797..3539014(-) (pilC) [Kineobactrum salinum strain M2]
MATSASKQNTFTWSGTDRNGRVSKGEISAQSSAMARAQLRTQGIVPKAVRKKAKPLFGGGKPIKPADVAIFTRQLATMMK
AGVPLVQSFDIVAEGLDKPKMRDLVISIKNDVASGSGLAPSLAKYPRYFDELFCSLVASGEGSGTLEVMLSRVATYKEKT
EQLKAKIKKAMTYPTAVVIVALVVTGILLVKVVPQFAETFRSFGSDLPAFTLLVLGISEFVQSWWFIMALGLVATGYAFK
EAKIRSEAFAVFLDRLALRLPVVGGIVHDAIIARFSRTLATTFAAGVPLVDALNSTAGAAGNSVYRTAILQIRDDVTTGS
TLYQSIKSTSMFPNMLLQMVSIGEESGALDEMLDKVANHYEEAVDNAVDSLSSLMEPVIMSILGVLVGGLMIAMYLPIFM
LGSVV
MATSASKQNTFTWSGTDRNGRVSKGEISAQSSAMARAQLRTQGIVPKAVRKKAKPLFGGGKPIKPADVAIFTRQLATMMK
AGVPLVQSFDIVAEGLDKPKMRDLVISIKNDVASGSGLAPSLAKYPRYFDELFCSLVASGEGSGTLEVMLSRVATYKEKT
EQLKAKIKKAMTYPTAVVIVALVVTGILLVKVVPQFAETFRSFGSDLPAFTLLVLGISEFVQSWWFIMALGLVATGYAFK
EAKIRSEAFAVFLDRLALRLPVVGGIVHDAIIARFSRTLATTFAAGVPLVDALNSTAGAAGNSVYRTAILQIRDDVTTGS
TLYQSIKSTSMFPNMLLQMVSIGEESGALDEMLDKVANHYEEAVDNAVDSLSSLMEPVIMSILGVLVGGLMIAMYLPIFM
LGSVV
Nucleotide
Download Length: 1218 bp
>NTDB_id=422459 G3T16_RS15725 WP_163496056.1 3537797..3539014(-) (pilC) [Kineobactrum salinum strain M2]
ATGGCAACCAGTGCAAGCAAGCAAAATACCTTCACCTGGAGCGGGACCGACCGCAACGGGCGTGTCTCCAAGGGCGAGAT
CAGTGCCCAGAGTTCGGCCATGGCCAGGGCCCAGTTGCGCACCCAGGGCATCGTGCCCAAGGCGGTGCGCAAGAAGGCCA
AGCCCCTGTTCGGCGGCGGCAAGCCGATCAAGCCCGCGGATGTCGCCATCTTTACGCGCCAGCTGGCAACGATGATGAAG
GCCGGGGTGCCGCTGGTGCAGAGCTTCGATATCGTGGCCGAAGGGCTGGACAAGCCCAAGATGCGCGACCTGGTGATCAG
CATCAAGAATGACGTCGCTTCGGGCAGCGGCCTGGCGCCGTCGCTGGCCAAGTACCCGCGCTACTTCGACGAGCTGTTCT
GCAGTCTGGTGGCGTCCGGTGAGGGCTCCGGTACGCTGGAGGTCATGCTGAGCCGGGTGGCCACCTACAAGGAGAAAACC
GAACAGCTCAAGGCCAAGATCAAGAAGGCGATGACCTACCCCACGGCCGTGGTGATCGTGGCGCTGGTGGTCACCGGCAT
CCTGCTGGTCAAGGTGGTGCCGCAGTTTGCCGAAACCTTCCGCAGCTTCGGCTCCGACCTGCCCGCGTTCACATTGCTGG
TGCTGGGCATCTCCGAGTTCGTGCAGAGCTGGTGGTTCATCATGGCTCTGGGCCTGGTTGCGACGGGCTATGCCTTCAAG
GAGGCCAAGATCCGCTCCGAGGCCTTCGCCGTATTCCTGGACCGCCTGGCACTGCGGCTGCCGGTGGTCGGCGGCATTGT
CCACGATGCGATCATCGCCCGTTTTTCCCGCACCCTGGCCACCACCTTTGCCGCCGGGGTGCCGCTGGTGGACGCGCTCA
ACTCCACCGCGGGCGCCGCCGGGAACTCGGTCTACCGCACGGCCATCCTGCAGATCCGCGATGATGTCACCACCGGCTCC
ACTCTGTACCAGTCGATCAAGTCCACCAGCATGTTCCCCAACATGCTGCTGCAGATGGTCTCGATCGGGGAGGAATCCGG
CGCCCTGGATGAAATGCTGGACAAGGTGGCCAACCACTACGAAGAGGCGGTGGACAACGCGGTGGACAGCCTCAGTTCAC
TGATGGAACCGGTGATCATGTCCATTCTGGGCGTACTGGTGGGCGGCCTGATGATTGCGATGTACCTGCCCATCTTCATG
CTTGGCTCAGTGGTGTGA
ATGGCAACCAGTGCAAGCAAGCAAAATACCTTCACCTGGAGCGGGACCGACCGCAACGGGCGTGTCTCCAAGGGCGAGAT
CAGTGCCCAGAGTTCGGCCATGGCCAGGGCCCAGTTGCGCACCCAGGGCATCGTGCCCAAGGCGGTGCGCAAGAAGGCCA
AGCCCCTGTTCGGCGGCGGCAAGCCGATCAAGCCCGCGGATGTCGCCATCTTTACGCGCCAGCTGGCAACGATGATGAAG
GCCGGGGTGCCGCTGGTGCAGAGCTTCGATATCGTGGCCGAAGGGCTGGACAAGCCCAAGATGCGCGACCTGGTGATCAG
CATCAAGAATGACGTCGCTTCGGGCAGCGGCCTGGCGCCGTCGCTGGCCAAGTACCCGCGCTACTTCGACGAGCTGTTCT
GCAGTCTGGTGGCGTCCGGTGAGGGCTCCGGTACGCTGGAGGTCATGCTGAGCCGGGTGGCCACCTACAAGGAGAAAACC
GAACAGCTCAAGGCCAAGATCAAGAAGGCGATGACCTACCCCACGGCCGTGGTGATCGTGGCGCTGGTGGTCACCGGCAT
CCTGCTGGTCAAGGTGGTGCCGCAGTTTGCCGAAACCTTCCGCAGCTTCGGCTCCGACCTGCCCGCGTTCACATTGCTGG
TGCTGGGCATCTCCGAGTTCGTGCAGAGCTGGTGGTTCATCATGGCTCTGGGCCTGGTTGCGACGGGCTATGCCTTCAAG
GAGGCCAAGATCCGCTCCGAGGCCTTCGCCGTATTCCTGGACCGCCTGGCACTGCGGCTGCCGGTGGTCGGCGGCATTGT
CCACGATGCGATCATCGCCCGTTTTTCCCGCACCCTGGCCACCACCTTTGCCGCCGGGGTGCCGCTGGTGGACGCGCTCA
ACTCCACCGCGGGCGCCGCCGGGAACTCGGTCTACCGCACGGCCATCCTGCAGATCCGCGATGATGTCACCACCGGCTCC
ACTCTGTACCAGTCGATCAAGTCCACCAGCATGTTCCCCAACATGCTGCTGCAGATGGTCTCGATCGGGGAGGAATCCGG
CGCCCTGGATGAAATGCTGGACAAGGTGGCCAACCACTACGAAGAGGCGGTGGACAACGCGGTGGACAGCCTCAGTTCAC
TGATGGAACCGGTGATCATGTCCATTCTGGGCGTACTGGTGGGCGGCCTGATGATTGCGATGTACCTGCCCATCTTCATG
CTTGGCTCAGTGGTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilC | Pseudomonas stutzeri DSM 10701 |
61.975 |
100 |
0.62 |
| pilC | Acinetobacter baylyi ADP1 |
61.965 |
98.025 |
0.607 |
| pilC | Acinetobacter baumannii D1279779 |
60.05 |
98.272 |
0.59 |
| pilC | Legionella pneumophila strain ERS1305867 |
56.171 |
98.025 |
0.551 |
| pilG | Neisseria gonorrhoeae MS11 |
44.059 |
99.753 |
0.44 |
| pilG | Neisseria meningitidis 44/76-A |
44.059 |
99.753 |
0.44 |
| pilC | Vibrio cholerae strain A1552 |
41.565 |
100 |
0.42 |
| pilC | Vibrio campbellii strain DS40M4 |
41.379 |
100 |
0.415 |
| pilC | Thermus thermophilus HB27 |
36.935 |
98.272 |
0.363 |