Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | GYM74_RS10095 | Genome accession | NZ_CP048265 |
| Coordinates | 2319454..2319759 (-) | Length | 101 a.a. |
| NCBI ID | WP_220218089.1 | Uniprot ID | - |
| Organism | Gilliamella sp. ESL0405 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2314454..2324759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GYM74_RS10070 (GYM74_10045) | - | 2315022..2315750 (-) | 729 | WP_220218084.1 | Bax inhibitor-1/YccA family protein | - |
| GYM74_RS10075 (GYM74_10050) | moaE | 2315807..2316250 (-) | 444 | WP_220218085.1 | molybdopterin synthase catalytic subunit MoaE | - |
| GYM74_RS10080 (GYM74_10055) | moaD | 2316255..2316500 (-) | 246 | WP_220218086.1 | molybdopterin synthase sulfur carrier subunit | - |
| GYM74_RS10085 (GYM74_10060) | moaC | 2316518..2316997 (-) | 480 | WP_220218087.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| GYM74_RS10090 (GYM74_10065) | priA | 2317242..2319410 (+) | 2169 | WP_220218088.1 | primosomal protein N' | - |
| GYM74_RS10095 (GYM74_10070) | comEA/comE1 | 2319454..2319759 (-) | 306 | WP_220218089.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| GYM74_RS10100 (GYM74_10075) | - | 2319922..2321775 (-) | 1854 | WP_220218090.1 | SurA N-terminal domain-containing protein | - |
| GYM74_RS10105 (GYM74_10080) | lon | 2321912..2324347 (-) | 2436 | WP_220218091.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 10916.57 Da Isoelectric Point: 9.5959
>NTDB_id=420317 GYM74_RS10095 WP_220218089.1 2319454..2319759(-) (comEA/comE1) [Gilliamella sp. ESL0405]
MKLLSILSLLLLSFTFSGFSYAQSASPATAQQQQKQLDQVNINTATAEELTKALNGIGANKAQKIVEYREKFGPFVSIEQ
LKEVSGIGQAILDKNAGKITL
MKLLSILSLLLLSFTFSGFSYAQSASPATAQQQQKQLDQVNINTATAEELTKALNGIGANKAQKIVEYREKFGPFVSIEQ
LKEVSGIGQAILDKNAGKITL
Nucleotide
Download Length: 306 bp
>NTDB_id=420317 GYM74_RS10095 WP_220218089.1 2319454..2319759(-) (comEA/comE1) [Gilliamella sp. ESL0405]
ATGAAATTATTATCAATTTTAAGTCTTTTATTATTAAGCTTTACCTTTTCCGGTTTTAGTTATGCTCAATCTGCTTCTCC
CGCTACTGCACAGCAACAACAAAAGCAGCTAGATCAAGTCAATATTAACACTGCAACAGCAGAAGAGTTAACAAAAGCAT
TAAATGGAATTGGCGCAAATAAAGCGCAAAAAATTGTCGAATATCGGGAAAAATTTGGACCTTTTGTATCAATTGAACAA
TTGAAGGAAGTTTCTGGCATCGGGCAAGCAATACTAGATAAAAATGCAGGAAAAATAACCTTATAG
ATGAAATTATTATCAATTTTAAGTCTTTTATTATTAAGCTTTACCTTTTCCGGTTTTAGTTATGCTCAATCTGCTTCTCC
CGCTACTGCACAGCAACAACAAAAGCAGCTAGATCAAGTCAATATTAACACTGCAACAGCAGAAGAGTTAACAAAAGCAT
TAAATGGAATTGGCGCAAATAAAGCGCAAAAAATTGTCGAATATCGGGAAAAATTTGGACCTTTTGTATCAATTGAACAA
TTGAAGGAAGTTTCTGGCATCGGGCAAGCAATACTAGATAAAAATGCAGGAAAAATAACCTTATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.321 |
100 |
0.525 |
| comEA | Vibrio cholerae C6706 |
47.368 |
94.059 |
0.446 |
| comEA | Vibrio cholerae strain A1552 |
47.368 |
94.059 |
0.446 |
| comEA | Vibrio campbellii strain DS40M4 |
40.594 |
100 |
0.406 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
61.29 |
61.386 |
0.376 |
| comE | Neisseria gonorrhoeae MS11 |
39.362 |
93.069 |
0.366 |
| comE | Neisseria gonorrhoeae MS11 |
39.362 |
93.069 |
0.366 |
| comE | Neisseria gonorrhoeae MS11 |
39.362 |
93.069 |
0.366 |
| comE | Neisseria gonorrhoeae MS11 |
39.362 |
93.069 |
0.366 |
| comEA | Legionella pneumophila str. Paris |
40.659 |
90.099 |
0.366 |
| comEA | Legionella pneumophila strain ERS1305867 |
40.659 |
90.099 |
0.366 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
40.659 |
90.099 |
0.366 |