Detailed information NTG0042007

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SPPN_RS07435
• Genome accession: NC_015875
• Coordinates: 1445022..1445492 (-)
• Length: 156 a.a.
• NCBI ID: WP_000609599.1
• Uniprot ID: A0A0U0D8N7
• Organism: Streptococcus pseudopneumoniae IS7493
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1440022..1450492

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPPN_RS07400 (SPPN_07520)	-	1440033..1440968 (-)	936	WP_000036065.1	manganese-dependent inorganic pyrophosphatase	-
SPPN_RS07405 (SPPN_07525)	-	1441051..1441338 (-)	288	WP_000384642.1	GIY-YIG nuclease family protein	-
SPPN_RS07410 (SPPN_07530)	-	1441328..1442077 (-)	750	WP_000390770.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
SPPN_RS07415 (SPPN_07535)	-	1442131..1442490 (-)	360	WP_000689593.1	S1 RNA-binding domain-containing protein	-
SPPN_RS07420 (SPPN_07540)	-	1442492..1443892 (-)	1401	WP_000339001.1	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	-
SPPN_RS07425 (SPPN_07545)	-	1443974..1444477 (-)	504	WP_004244450.1	GNAT family N-acetyltransferase	-
SPPN_RS07430 (SPPN_07550)	rpsR	1444751..1444990 (-)	240	WP_000068664.1	30S ribosomal protein S18	-
SPPN_RS07435 (SPPN_07555)	ssbA	1445022..1445492 (-)	471	WP_000609599.1	single-stranded DNA-binding protein SsbA	Machinery gene
SPPN_RS07440 (SPPN_07560)	rpsF	1445504..1445794 (-)	291	WP_001151777.1	30S ribosomal protein S6	-
SPPN_RS07445 (SPPN_07565)	asnS	1445947..1447290 (-)	1344	WP_000167144.1	asparagine--tRNA ligase	-
SPPN_RS07450 (SPPN_07570)	-	1447310..1447675 (-)	366	WP_000565215.1	VOC family protein	-
SPPN_RS07455 (SPPN_07575)	-	1447668..1448855 (-)	1188	WP_000777796.1	pyridoxal phosphate-dependent aminotransferase	-
SPPN_RS07460 (SPPN_07580)	-	1448852..1449340 (-)	489	WP_000747177.1	DUF5590 domain-containing protein	-
SPPN_RS07470 (SPPN_07585)	-	1449598..1450146 (+)	549	WP_000039624.1	NADPH-dependent FMN reductase	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17396.25 Da
• Isoelectric Point: 4.9164

>NTDB_id=42007 SPPN_RS07435 WP_000609599.1 1445022..1445492(-) (ssbA) [Streptococcus pseudopneumoniae IS7493]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTR
SYDNQQGQRIYVTEVVAENFQMLESRSVREGHTGGAYSAPTANYSAPTNSVPDFSRDENPFGTTNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=42007 SPPN_RS07435 WP_000609599.1 1445022..1445492(-) (ssbA) [Streptococcus pseudopneumoniae IS7493]
ATGATTAACAATGTTGTACTTGTAGGGCGCATGACACGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGTCAACAGGCTGAGAACCTTGCTAATTGGGCTAAAAAAGGCTCACTTATCGGGGTGACAGGCCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTATCTACGTGACAGAGGTCGTGGCTGAGAATTTCCAAATGTTAGAAAGCCGTAG
TGTGCGTGAAGGTCATACAGGTGGAGCTTACTCTGCACCAACTGCAAACTATTCAGCGCCTACAAATTCAGTACCAGACT
TTTCACGTGATGAAAATCCATTTGGAACAACAAATCCATTGGATATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A0U0D8N7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	54.651	100	0.603
ssb	Latilactobacillus sakei subsp. sakei 23K	52.841	100	0.596
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.282	75	0.385
ssbB/cilA	Streptococcus mitis SK321	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae D39	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae R6	50.427	75	0.378
ssbB/cilA	Streptococcus mitis NCTC 12261	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378
ssbB	Bacillus subtilis subsp. subtilis str. 168	54.717	67.949	0.372