Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   M594_RS10015 Genome accession   NZ_CP047883
Coordinates   2084749..2085930 (+) Length   393 a.a.
NCBI ID   WP_173876723.1    Uniprot ID   A0A6M9F2N5
Organism   Streptococcus mitis strain S022-V3-A4     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2079749..2090930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS09975 (M594_10020) - 2080798..2081340 (+) 543 WP_173876721.1 TetR/AcrR family transcriptional regulator -
  M594_RS09990 (M594_10035) comE 2081583..2082335 (-) 753 WP_000866074.1 competence system response regulator transcription factor ComE Regulator
  M594_RS09995 (M594_10040) comD/comD2 2082332..2083657 (-) 1326 WP_173876722.1 competence system sensor histidine kinase ComD Regulator
  M594_RS10000 (M594_10045) comC/comC2 2083678..2083803 (-) 126 WP_049535516.1 competence-stimulating peptide ComC Regulator
  M594_RS10010 (M594_10055) rlmH 2084086..2084565 (-) 480 WP_042900048.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  M594_RS10015 (M594_10060) htrA 2084749..2085930 (+) 1182 WP_173876723.1 S1C family serine protease Regulator
  M594_RS10020 (M594_10065) spo0J 2085988..2086746 (+) 759 WP_173876724.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 41753.56 Da        Isoelectric Point: 6.1475

>NTDB_id=418292 M594_RS10015 WP_173876723.1 2084749..2085930(+) (htrA) [Streptococcus mitis strain S022-V3-A4]
MKHLKTFYKKWFQLLVVIVISFFSGALGSFSINQLTQKSGVSNSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSA
NRQNSVFGNDDTDTDSQQISSEGSGVIYKKNDKEAYIVTNNHVINGASKVDIRLSDGTKVPGEIVGADTFSDIAVVKISS
EKVTTVAEFGDSSKLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLIN
IQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNINTSDIRRLNIPSNVTSGVV
VRSVQGNMPANGHLEKYDVITKVDDKDIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLDKSSGDLES

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=418292 M594_RS10015 WP_173876723.1 2084749..2085930(+) (htrA) [Streptococcus mitis strain S022-V3-A4]
ATGAAACATCTAAAAACATTTTACAAAAAATGGTTTCAATTATTAGTCGTTATCGTCATTAGCTTTTTTAGTGGGGCTTT
GGGTAGCTTTTCAATAAACCAACTAACTCAAAAAAGTGGTGTAAGCAACTCTAACAACAATAGCACCATTACACAGACTG
CCTATAAGAACGAAAATTCAACAACACAGGCTGTTAACAAAGTAAAAGATGCTGTTGTTTCTGTTATTACTTATTCGGCA
AACAGACAAAATAGCGTATTTGGCAATGATGATACTGACACAGATTCTCAACAAATCTCTAGTGAAGGATCTGGGGTTAT
TTATAAAAAGAATGATAAAGAAGCTTATATTGTCACCAATAATCACGTTATAAATGGCGCCAGCAAAGTAGATATTCGTT
TGTCAGATGGAACTAAAGTACCCGGAGAAATTGTCGGAGCGGACACTTTCTCTGATATTGCTGTCGTCAAAATCTCTTCA
GAAAAAGTGACAACAGTAGCTGAGTTTGGTGATTCTAGCAAGTTAACCGTAGGAGAAACTGCTATTGCCATCGGTAGCCC
ATTAGGTTCTGAATATGCTAATACTGTCACTCAAGGTATCGTATCTAGTCTCAATCGAAATGTATCTTTAAAATCTGAAG
ATGGACAAGCTATTTCTACAAAAGCCATCCAGACGGATACTGCTATTAACCCAGGTAACTCTGGTGGCCCACTGATCAAT
ATTCAAGGACAGGTTATAGGAATTACCTCAAGTAAAATTGCCACAAATGGAGGAACATCTGTAGAAGGTCTTGGTTTTGC
AATCCCTGCAAATGATGCTATCAATATTATTGAACAGTTAGAAAAGAACGGAAAAGTGACTCGTCCAGCTTTGGGAATTC
AAATGGTCAATCTCTCAAATATTAATACAAGTGATATTAGAAGACTGAATATTCCAAGCAATGTTACATCTGGTGTAGTT
GTTCGTTCTGTGCAGGGTAATATGCCTGCCAATGGTCACCTTGAAAAATACGATGTTATTACAAAAGTAGATGACAAAGA
CATTGCTTCATCAACAGACTTACAAAGTGCTCTTTACAATCATTCTATCGGAGACACCATTAAGATAACTTACTATCGTA
ACGGTAAAGAAGAAACTACATCTATTAAACTTGACAAGAGTTCAGGTGATTTAGAATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6M9F2N5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

98.473

100

0.985

  htrA Streptococcus pneumoniae Rx1

97.455

100

0.975

  htrA Streptococcus pneumoniae D39

97.455

100

0.975

  htrA Streptococcus pneumoniae R6

97.455

100

0.975

  htrA Streptococcus pneumoniae TIGR4

97.455

100

0.975

  htrA Streptococcus gordonii str. Challis substr. CH1

66.162

100

0.667

  htrA Streptococcus mutans UA159

54.569

100

0.547


Multiple sequence alignment