Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   M594_RS10020 Genome accession   NZ_CP047883
Coordinates   2085988..2086746 (+) Length   252 a.a.
NCBI ID   WP_173876724.1    Uniprot ID   A0A6M9F841
Organism   Streptococcus mitis strain S022-V3-A4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2080988..2091746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS09990 (M594_10035) comE 2081583..2082335 (-) 753 WP_000866074.1 competence system response regulator transcription factor ComE Regulator
  M594_RS09995 (M594_10040) comD/comD2 2082332..2083657 (-) 1326 WP_173876722.1 competence system sensor histidine kinase ComD Regulator
  M594_RS10000 (M594_10045) comC/comC2 2083678..2083803 (-) 126 WP_049535516.1 competence-stimulating peptide ComC Regulator
  M594_RS10010 (M594_10055) rlmH 2084086..2084565 (-) 480 WP_042900048.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  M594_RS10015 (M594_10060) htrA 2084749..2085930 (+) 1182 WP_173876723.1 S1C family serine protease Regulator
  M594_RS10020 (M594_10065) spo0J 2085988..2086746 (+) 759 WP_173876724.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29081.50 Da        Isoelectric Point: 9.4034

>NTDB_id=418293 M594_RS10020 WP_173876724.1 2085988..2086746(+) (spo0J) [Streptococcus mitis strain S022-V3-A4]
MEKFEMISITDIQKNPYQPRKEFDGEKLHELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
LSDQEMMIQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVEKGKLSQAHA
RSLVGLNKEQQDHFFQRIIEEDISVRKLESLLTEKKQKKQQKNNHFIQNEEEQLKKLLGLDVKIKMSKKDSGKIIIAFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=418293 M594_RS10020 WP_173876724.1 2085988..2086746(+) (spo0J) [Streptococcus mitis strain S022-V3-A4]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCTCGAAAAGAATTTGATGGAGAAAA
ACTACATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTAAGGTCTATCCCAGCTGTTGTTAAACAA
CTCTCAGACCAAGAGATGATGATCCAGTCTATCATTGAAAATTTACAGAGGGAAAATTTAAATCCAATAGAAGAAGCACG
CGCCTATGAATCTCTTGTAGAGAAAGGATTTACCCATGCTGAAATTGCAGATAAAATGGGCAAGTCTCGTCCTTATATCA
GCAACTCTATTCGCTTGCTGTCCTTGCCAGAACAGATCCTCTCAGAAGTAGAAAAAGGCAAACTATCACAAGCACATGCG
CGTTCGCTAGTTGGATTAAATAAGGAACAACAAGACCATTTCTTTCAACGAATCATCGAGGAAGACATTTCTGTAAGGAA
ATTAGAATCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAAATAATCATTTCATACAAAATGAAGAAGAACAGT
TAAAAAAACTACTCGGATTAGATGTAAAAATCAAAATGTCTAAAAAAGATAGTGGCAAAATCATTATTGCTTTCTCAAAC
CAAGAAGAATACAGTAGAATTATTAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6M9F841

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

49.407

100

0.496


Multiple sequence alignment