Detailed information NTG0417807

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: E3S74_RS07900
• Genome accession: NZ_CP047851
• Coordinates: 1648609..1648920 (-)
• Length: 103 a.a.
• NCBI ID: WP_160200238.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain UP_338
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1643609..1653920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3S74_RS07865 (E3S74_07865)	gcvPA	1644111..1645457 (-)	1347	WP_000019697.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
E3S74_RS07870 (E3S74_07870)	gcvT	1645477..1646568 (-)	1092	WP_000093347.1	glycine cleavage system aminomethyltransferase GcvT	-
E3S74_RS07875 (E3S74_07875)	-	1646727..1647251 (-)	525	WP_001015125.1	shikimate kinase	-
E3S74_RS07880 (E3S74_07880)	-	1647241..1647387 (-)	147	WP_001789879.1	hypothetical protein	-
E3S74_RS07885 (E3S74_07885)	comGF	1647484..1647981 (-)	498	WP_001794055.1	competence type IV pilus minor pilin ComGF	Machinery gene
E3S74_RS07890 (E3S74_07890)	comGE	1647899..1648198 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
E3S74_RS07895 (E3S74_07895)	comGD	1648185..1648631 (-)	447	WP_001791207.1	competence type IV pilus minor pilin ComGD	Machinery gene
E3S74_RS07900 (E3S74_07900)	comGC	1648609..1648920 (-)	312	WP_160200238.1	competence type IV pilus major pilin ComGC	Machinery gene
E3S74_RS07905 (E3S74_07905)	comGB	1648934..1650004 (-)	1071	WP_000776412.1	competence type IV pilus assembly protein ComGB	Machinery gene
E3S74_RS07910 (E3S74_07910)	comGA	1649976..1650950 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
E3S74_RS07915 (E3S74_07915)	-	1651002..1651625 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
E3S74_RS07920 (E3S74_07920)	-	1651622..1651951 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
E3S74_RS07925 (E3S74_07925)	-	1651951..1652937 (-)	987	WP_000161314.1	ROK family glucokinase	-
E3S74_RS07930 (E3S74_07930)	-	1652934..1653137 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11301.33 Da
• Isoelectric Point: 8.5268

>NTDB_id=417807 E3S74_RS07900 WP_160200238.1 1648609..1648920(-) (comGC) [Staphylococcus aureus strain UP_338]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEGQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=417807 E3S74_RS07900 WP_160200238.1 1648609..1648920(-) (comGC) [Staphylococcus aureus strain UP_338]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGGGCAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	99.029	100	0.99
comGC	Staphylococcus aureus N315	99.029	100	0.99
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369