Detailed information NTG0417140

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: E3T08_RS07400
• Genome accession: NZ_CP047815
• Coordinates: 1557391..1557702 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain UP_1484
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1552391..1562702

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3T08_RS07365 (E3T08_07365)	gcvPA	1552893..1554239 (-)	1347	WP_000019689.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
E3T08_RS07370 (E3T08_07370)	gcvT	1554259..1555350 (-)	1092	WP_000093348.1	glycine cleavage system aminomethyltransferase GcvT	-
E3T08_RS07375 (E3T08_07375)	-	1555509..1556033 (-)	525	WP_001015123.1	shikimate kinase	-
E3T08_RS07380 (E3T08_07380)	-	1556023..1556169 (-)	147	WP_001789879.1	hypothetical protein	-
E3T08_RS07385 (E3T08_07385)	comGF	1556266..1556763 (-)	498	WP_029642894.1	competence type IV pilus minor pilin ComGF	Machinery gene
E3T08_RS07390 (E3T08_07390)	comGE	1556681..1556980 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
E3T08_RS07395 (E3T08_07395)	comGD	1556967..1557413 (-)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
E3T08_RS07400 (E3T08_07400)	comGC	1557391..1557702 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
E3T08_RS07405 (E3T08_07405)	comGB	1557716..1558786 (-)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
E3T08_RS07410 (E3T08_07410)	comGA	1558758..1559732 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
E3T08_RS07415 (E3T08_07415)	-	1559757..1561403 (-)	1647	WP_000277718.1	IS1182 family transposase	-
E3T08_RS07420 (E3T08_07420)	-	1561698..1562321 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
E3T08_RS07425 (E3T08_07425)	-	1562318..1562647 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=417140 E3T08_RS07400 WP_000472256.1 1557391..1557702(-) (comGC) [Staphylococcus aureus strain UP_1484]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=417140 E3T08_RS07400 WP_000472256.1 1557391..1557702(-) (comGC) [Staphylococcus aureus strain UP_1484]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369