Detailed information NTG0407744

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MS10711_RS19090
• Genome accession: NZ_CP058922
• Coordinates: 3892077..3893060 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS10711
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3887077..3898060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MS10711_RS19065 (MS10711_3727)	bcsF	3887238..3887429 (+)	192	WP_077572268.1	cellulose biosynthesis protein BcsF	-
MS10711_RS19070 (MS10711_3728)	bcsG	3887426..3889105 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
MS10711_RS19075 (MS10711_3729)	ldrD	3889192..3889299 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS10711_RS19080 (MS10711_3730)	yhjV	3889775..3891046 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
MS10711_RS19085 (MS10711_3731)	dppF	3891076..3892080 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MS10711_RS19090 (MS10711_3732)	amiE	3892077..3893060 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
MS10711_RS19095 (MS10711_3733)	dppC	3893071..3893973 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MS10711_RS19100 (MS10711_3734)	dppB	3893983..3895002 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
MS10711_RS19105 (MS10711_3735)	dppA	3895309..3896916 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=407744 MS10711_RS19090 WP_001540025.1 3892077..3893060(-) (amiE) [Escherichia coli strain MS10711]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=407744 MS10711_RS19090 WP_001540025.1 3892077..3893060(-) (amiE) [Escherichia coli strain MS10711]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404