Detailed information NTG0403814

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: GK020_RS14125
• Genome accession: NZ_CP046392
• Coordinates: 2906773..2908911 (-)
• Length: 712 a.a.
• NCBI ID: WP_171501550.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain WMB-7
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2901773..2913911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GK020_RS14110	-	2904240..2905076 (-)	837	WP_156189587.1	hypothetical protein	-
GK020_RS14115	aroB	2905089..2906171 (-)	1083	WP_045795260.1	3-dehydroquinate synthase	-
GK020_RS14120	aroK	2906194..2906736 (-)	543	WP_016658449.1	shikimate kinase AroK	-
GK020_RS14125	pilQ	2906773..2908911 (-)	2139	WP_171501550.1	type IV pilus secretin PilQ	Machinery gene
GK020_RS14130	pilP	2908972..2909499 (-)	528	WP_035363443.1	pilus assembly protein PilP	Machinery gene
GK020_RS14135	pilO	2909499..2910218 (-)	720	WP_045795258.1	type 4a pilus biogenesis protein PilO	Machinery gene
GK020_RS14140	pilN	2910215..2910850 (-)	636	WP_156189589.1	PilN domain-containing protein	Machinery gene
GK020_RS14145	pilM	2910850..2911908 (-)	1059	WP_045795257.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 712 a.a.
• Molecular weight: 76829.93 Da
• Isoelectric Point: 5.0523

>NTDB_id=403814 GK020_RS14125 WP_171501550.1 2906773..2908911(-) (pilQ) [Acinetobacter indicus strain WMB-7]
MNNLFRQFSMGAVAMAVMQVANAQVSITNIVPMQIPGQGTEIRVMFNGLPPQPAAYQLEQPSRLVLDFDKAQQSLKQASI
PVATREASSVDVSSDAQRARLTVNLAEAGAFTTRVEGNTFILKINSTQAAATPVAVQQTAQGVSNIGFQRGAEGEGQVVI
DLAGSNTPVDVQQQGSKIIVRTLGNKIPAHLARRLNVNDFATPVSTIDAQNDGGNGVITIQSAGSYEYMAYQAENKLTIS
LKRPVDKNPFKPRAAQSYTGKKISLDFQDIEVRRVLQLLADFTGINMVAADTVQGNITLRLKDVPWDQALDIILKTKNLD
KRRNGNVIWIAPVAELIKAEEEEAKAIAQSVKLAPLQTEYIQLNYAKAADIEKLITDGKNASNSRGGTNSGSGTDPLGDS
VGSLLSPRGTVSVDPRTNTLIINDTAQKIDQIRGMIDLLDVSVKQVMIEARIVRATTDFTKEMGVKWGILSQGIMNNNHL
LVGGSDTTLWNLREPEFDDERGGYTYEIERPQNLNVDLGVTSPGASRIAFGLISLSDFMLDLELSALQADGYGEVISTPK
VLTADRQQAKVASGTQIPYQSAEGGGANAVSTTEFIDATLSLDVTPSITPDGKVQMNLNITSDSPGAPTPTGQLTINKNS
INTNVLVDNGETVVLGGIFEQQTANQQTKVPFLGDIPYLGRLFRKDIKSDNKRELLIFVTPRIVNDSVSRNH

Nucleotide

• Length: 2139 bp

>NTDB_id=403814 GK020_RS14125 WP_171501550.1 2906773..2908911(-) (pilQ) [Acinetobacter indicus strain WMB-7]
ATGAACAATTTGTTCCGTCAGTTTTCAATGGGCGCTGTTGCGATGGCCGTCATGCAAGTGGCCAATGCGCAGGTCAGCAT
TACCAATATCGTACCCATGCAAATTCCAGGACAAGGTACTGAAATTCGTGTCATGTTCAATGGCTTGCCACCTCAGCCTG
CAGCCTATCAGCTTGAGCAGCCATCACGTTTGGTGCTGGATTTTGATAAAGCCCAGCAGAGCTTAAAACAGGCCAGCATT
CCGGTTGCGACCCGAGAAGCCAGCTCGGTTGATGTCAGTTCCGATGCCCAGCGTGCACGTTTAACGGTCAATCTGGCTGA
AGCCGGTGCTTTTACTACCCGTGTCGAAGGCAATACTTTTATTCTTAAAATTAATAGCACTCAGGCAGCCGCAACCCCAG
TAGCCGTACAGCAGACGGCTCAAGGCGTATCGAATATTGGCTTCCAGCGCGGTGCAGAAGGGGAAGGTCAGGTGGTGATT
GACCTGGCAGGCAGCAATACTCCGGTCGATGTACAACAGCAAGGCAGTAAAATTATTGTCCGTACTTTGGGCAATAAAAT
TCCTGCACATCTGGCGCGCCGGTTAAATGTCAATGATTTTGCCACGCCGGTATCTACCATTGATGCGCAAAATGATGGTG
GTAATGGGGTAATTACCATTCAGTCGGCGGGAAGCTATGAATACATGGCGTATCAGGCGGAAAATAAACTGACCATTAGC
CTGAAACGCCCGGTAGATAAGAACCCGTTTAAACCGCGTGCAGCACAAAGCTATACCGGCAAAAAGATTTCTTTAGATTT
CCAGGATATTGAAGTGCGTCGTGTGCTGCAGTTACTGGCGGATTTTACCGGGATTAACATGGTTGCCGCCGATACGGTAC
AAGGCAATATCACCTTACGTCTCAAAGATGTGCCGTGGGATCAGGCACTAGATATTATTTTAAAAACTAAAAATCTGGAT
AAACGCCGTAACGGCAATGTGATCTGGATTGCACCCGTCGCAGAACTGATCAAGGCCGAAGAAGAAGAAGCCAAAGCGAT
TGCACAAAGCGTCAAGCTGGCGCCGTTGCAAACCGAATATATTCAGTTAAATTATGCCAAGGCTGCTGATATTGAGAAAC
TGATTACTGATGGTAAAAACGCATCCAATTCTCGTGGCGGCACAAATTCGGGTTCAGGGACAGATCCACTTGGTGATAGC
GTCGGTAGTTTGCTCAGCCCTCGCGGTACCGTGTCAGTTGATCCACGAACCAACACCCTGATTATTAATGATACCGCGCA
AAAGATTGACCAGATTCGCGGCATGATTGACTTGCTGGATGTGTCAGTGAAACAGGTGATGATTGAAGCGCGTATTGTGC
GTGCCACCACTGATTTTACCAAAGAGATGGGGGTGAAGTGGGGCATCCTGTCACAAGGGATCATGAATAATAACCATCTT
TTGGTTGGTGGTAGTGATACCACACTGTGGAATTTACGTGAGCCGGAATTTGACGATGAGCGTGGTGGTTATACCTATGA
AATTGAACGTCCACAAAACCTGAATGTCGATTTGGGAGTCACCAGCCCAGGTGCGAGCCGGATTGCTTTTGGTCTCATCA
GCCTGTCTGACTTTATGCTGGATTTAGAACTGTCTGCATTACAAGCTGATGGCTATGGTGAAGTAATTTCGACCCCAAAA
GTACTGACTGCTGACAGGCAACAGGCCAAAGTCGCTTCAGGTACGCAGATCCCGTATCAGTCTGCTGAAGGAGGTGGTGC
CAATGCGGTGTCCACCACCGAGTTTATTGATGCAACCTTAAGTCTGGATGTAACGCCAAGTATCACCCCGGATGGTAAAG
TGCAGATGAACCTGAATATCACCAGTGATAGTCCAGGAGCACCAACCCCAACCGGTCAGCTGACGATTAACAAAAACTCG
ATCAATACCAATGTACTGGTCGATAATGGTGAAACCGTCGTGCTCGGTGGTATTTTTGAGCAGCAGACAGCCAATCAGCA
AACCAAAGTGCCATTCCTGGGGGATATTCCGTATTTAGGCCGTTTATTCCGTAAAGATATTAAATCGGACAATAAACGTG
AGTTGCTGATTTTTGTGACACCACGAATTGTTAATGACAGTGTTTCAAGAAATCATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (290-332)

• AMIN domain (AMIN) (40-121)

• Bacterial type II/III secretion system short domain (Secretin_N) (359-445)

• Bacterial type II and III secretion system protein (Secretin) (546-704)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	76.87	100	0.779
pilQ	Acinetobacter baumannii strain A118	76.731	100	0.778
comQ	Acinetobacter baylyi ADP1	74.51	100	0.747
pilQ	Pseudomonas aeruginosa PAK	40.228	98.455	0.396
pilQ	Legionella pneumophila strain ERS1305867	38.472	99.298	0.382
pilQ	Legionella pneumophila strain Lp02	38.472	99.298	0.382