Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | GH799_RS14665 | Genome accession | NZ_CP045794 |
| Coordinates | 2943196..2943480 (-) | Length | 94 a.a. |
| NCBI ID | WP_021449594.1 | Uniprot ID | - |
| Organism | Vibrio parahaemolyticus 10329 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2938196..2948480
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH799_RS14640 (GH799_14640) | - | 2938690..2939904 (+) | 1215 | WP_005456922.1 | pyridoxal phosphate-dependent aminotransferase | - |
| GH799_RS14645 (GH799_14645) | yfbR | 2939995..2940579 (+) | 585 | WP_005482513.1 | 5'-deoxynucleotidase | - |
| GH799_RS14650 (GH799_14650) | - | 2940592..2941926 (+) | 1335 | WP_043027432.1 | anti-phage deoxyguanosine triphosphatase | - |
| GH799_RS14655 (GH799_14655) | - | 2941936..2942550 (-) | 615 | WP_005482520.1 | DTW domain-containing protein | - |
| GH799_RS14660 (GH799_14660) | rrtA | 2942554..2943105 (+) | 552 | WP_005495980.1 | rhombosortase | - |
| GH799_RS14665 (GH799_14665) | comEA | 2943196..2943480 (-) | 285 | WP_021449594.1 | ComEA family DNA-binding protein | Machinery gene |
| GH799_RS14670 (GH799_14670) | ppiD | 2943631..2945490 (-) | 1860 | WP_005495983.1 | peptidylprolyl isomerase | - |
| GH799_RS14675 (GH799_14675) | - | 2945690..2945962 (-) | 273 | WP_005382341.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10249.91 Da Isoelectric Point: 5.8425
>NTDB_id=397259 GH799_RS14665 WP_021449594.1 2943196..2943480(-) (comEA) [Vibrio parahaemolyticus 10329]
MKWILTLCLVVFAPLSLAADTKADKYEGIEITVNINTASAEEIATMLKGIGEKKAQSIVDYRTEHGPFKTAADLTNVKGI
GEATIKKNEDRILL
MKWILTLCLVVFAPLSLAADTKADKYEGIEITVNINTASAEEIATMLKGIGEKKAQSIVDYRTEHGPFKTAADLTNVKGI
GEATIKKNEDRILL
Nucleotide
Download Length: 285 bp
>NTDB_id=397259 GH799_RS14665 WP_021449594.1 2943196..2943480(-) (comEA) [Vibrio parahaemolyticus 10329]
ATGAAATGGATTTTAACCTTGTGTTTAGTGGTGTTCGCACCACTCAGTTTGGCCGCTGATACCAAGGCTGATAAATATGA
AGGAATTGAAATTACGGTCAATATCAATACTGCTTCTGCAGAAGAGATAGCAACGATGCTGAAAGGTATTGGCGAAAAGA
AAGCGCAAAGCATAGTTGACTACCGTACCGAGCACGGCCCATTTAAAACAGCAGCTGATTTAACCAATGTAAAAGGAATT
GGTGAAGCAACCATCAAGAAAAACGAAGACCGCATTCTTCTATAA
ATGAAATGGATTTTAACCTTGTGTTTAGTGGTGTTCGCACCACTCAGTTTGGCCGCTGATACCAAGGCTGATAAATATGA
AGGAATTGAAATTACGGTCAATATCAATACTGCTTCTGCAGAAGAGATAGCAACGATGCTGAAAGGTATTGGCGAAAAGA
AAGCGCAAAGCATAGTTGACTACCGTACCGAGCACGGCCCATTTAAAACAGCAGCTGATTTAACCAATGTAAAAGGAATT
GGTGAAGCAACCATCAAGAAAAACGAAGACCGCATTCTTCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
100 |
100 |
1 |
| comEA | Vibrio campbellii strain DS40M4 |
77.895 |
100 |
0.787 |
| comEA | Vibrio cholerae C6706 |
62.766 |
100 |
0.628 |
| comEA | Vibrio cholerae strain A1552 |
62.766 |
100 |
0.628 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.957 |
0.372 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
56.452 |
65.957 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comEA | Acinetobacter baylyi ADP1 |
47.222 |
76.596 |
0.362 |