Detailed information    

insolico Bioinformatically predicted

Overview


Name   mutX   Type   Machinery gene
Locus tag   SGGB_RS04350 Genome accession   NC_017576
Coordinates   854844..855326 (+) Length   160 a.a.
NCBI ID   WP_013642957.1    Uniprot ID   A0A1I7FI41
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC 43143     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 849844..860326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGB_RS04320 (SGGB_0813) - 850030..850818 (+) 789 WP_014620005.1 Nif3-like dinuclear metal center hexameric protein -
  SGGB_RS04325 (SGGB_0814) rfbA 851005..851874 (+) 870 WP_012961788.1 glucose-1-phosphate thymidylyltransferase RfbA -
  SGGB_RS04330 (SGGB_0815) - 851874..852467 (+) 594 WP_009853945.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  SGGB_RS04335 (SGGB_0816) - 852467..852955 (+) 489 WP_014620006.1 phosphoribosylanthranilate isomerase -
  SGGB_RS04340 (SGGB_0817) rfbB 853115..854164 (+) 1050 WP_014620007.1 dTDP-glucose 4,6-dehydratase -
  SGGB_RS04345 (SGGB_0818) - 854302..854724 (+) 423 WP_014620008.1 HD domain-containing protein -
  SGGB_RS04350 (SGGB_0819) mutX 854844..855326 (+) 483 WP_013642957.1 NUDIX hydrolase Machinery gene
  SGGB_RS04355 (SGGB_0820) - 855419..856606 (+) 1188 WP_014620009.1 AI-2E family transporter -
  SGGB_RS04360 (SGGB_0821) - 856596..857831 (+) 1236 WP_014620010.1 tetratricopeptide repeat protein -
  SGGB_RS04365 (SGGB_0822) - 857815..857991 (+) 177 WP_009853950.1 hypothetical protein -
  SGGB_RS04370 (SGGB_0823) - 858113..858415 (+) 303 WP_009853951.1 ArsR/SmtB family transcription factor -
  SGGB_RS04375 (SGGB_0824) - 858515..859703 (+) 1189 Protein_813 NADH-dependent flavin oxidoreductase -

Sequence


Protein


Download         Length: 160 a.a.        Molecular weight: 18769.02 Da        Isoelectric Point: 4.2866

>NTDB_id=39549 SGGB_RS04350 WP_013642957.1 854844..855326(+) (mutX) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECAKREIFEETHFTVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLSKPTWEGDYEIFKWILDDVPFFSAKFTYDDEQRLIDKSVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=39549 SGGB_RS04350 WP_013642957.1 854844..855326(+) (mutX) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
ATGACAAAATTAGCAACGATTTGTTATATTGATAATGGTGAAGCGCTTTTGCTTTTACATCGCAATAAGAAACCAAATGA
TGTTCACGAAGGAAAATGGATTTCTGTTGGTGGTAAGCTAGAAGCAGGCGAGACACCAGATGAATGTGCGAAACGTGAGA
TTTTCGAGGAAACGCATTTTACTGTTAAAGAAATGGATTTCAAGGGAGTGATTACGTTCCCAGAATTCACACCAGGGCAT
GATTGGTACACTTATGTTTTCAAGGTAACCGATTTTGAGGGAGAATTGATTTCTGATGAAGAGTCACGTGAAGGAACTTT
AGAGTGGGTGCCTTACGACCAAGTTCTATCAAAACCGACTTGGGAGGGTGACTACGAAATTTTTAAATGGATTTTGGATG
ATGTGCCATTCTTTTCAGCCAAATTTACTTATGACGACGAACAGCGCTTGATTGATAAAAGCGTGACATTTTATGATAAA
TGA

Domains


Predicted by InterProScan.

(4-130)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1I7FI41

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.811

99.375

0.694


Multiple sequence alignment