Detailed information NTG0390393

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: FSA40_RS09210
• Genome accession: NZ_CP044493
• Coordinates: 1820232..1820627 (-)
• Length: 131 a.a.
• NCBI ID: WP_002263454.1
• Uniprot ID: Q8DS68
• Organism: Streptococcus mutans strain MD
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1815232..1825627

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSA40_RS09185	-	1815284..1815487 (-)	204	Protein_1717	hypothetical protein	-
FSA40_RS09190 (FSA40_1845)	-	1815553..1816859 (-)	1307	Protein_1718	extracellular solute-binding protein	-
FSA40_RS09195 (FSA40_1847)	-	1816852..1817532 (-)	681	WP_002263457.1	response regulator transcription factor	-
FSA40_RS09200 (FSA40_1848)	-	1817532..1818854 (-)	1323	WP_002263456.1	sensor histidine kinase	-
FSA40_RS09205 (FSA40_1849)	-	1818854..1819816 (-)	963	WP_002263455.1	sugar ABC transporter substrate-binding protein	-
FSA40_RS09210 (FSA40_1850)	ssbA	1820232..1820627 (-)	396	WP_002263454.1	single-stranded DNA-binding protein	Machinery gene
FSA40_RS09215 (FSA40_1851)	-	1820714..1821070 (-)	357	WP_002271268.1	rhodanese-like domain-containing protein	-
FSA40_RS09220 (FSA40_1852)	-	1821070..1821492 (-)	423	WP_002267583.1	MarR family transcriptional regulator	-
FSA40_RS09225 (FSA40_1853)	ytpR	1821590..1822216 (-)	627	WP_002264002.1	YtpR family tRNA-binding protein	-
FSA40_RS09230 (FSA40_1854)	-	1822213..1822542 (-)	330	WP_002264003.1	thioredoxin family protein	-
FSA40_RS09235 (FSA40_1855)	-	1822520..1822828 (-)	309	WP_002264004.1	DUF4651 domain-containing protein	-
FSA40_RS09240 (FSA40_1856)	pepA	1822888..1823955 (+)	1068	WP_002264005.1	glutamyl aminopeptidase	-
FSA40_RS09245 (FSA40_1857)	proC	1824011..1824781 (+)	771	WP_002267840.1	pyrroline-5-carboxylate reductase	-
FSA40_RS09250 (FSA40_1858)	-	1824867..1825529 (-)	663	WP_002266816.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14841.90 Da
• Isoelectric Point: 6.4855

>NTDB_id=390393 FSA40_RS09210 WP_002263454.1 1820232..1820627(-) (ssbA) [Streptococcus mutans strain MD]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=390393 FSA40_RS09210 WP_002263454.1 1820232..1820627(-) (ssbA) [Streptococcus mutans strain MD]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: Q8DS68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	100	100	1
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	58.036	85.496	0.496
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405